Pairwise Alignments

Query, 408 a.a., type IV pilin assembly protein PilC from Vibrio cholerae E7946 ATCC 55056

Subject, 406 a.a., MSHA biogenesis protein MshG (RefSeq) from Shewanella amazonensis SB2B

 Score =  219 bits (559), Expect = 9e-62
 Identities = 126/402 (31%), Positives = 227/402 (56%), Gaps = 8/402 (1%)

Query: 12  YRWKGINSNGKKVSGQMLAISEIEVRDKLKDQHI-----QIKKLKKGSVSLLARLTHRVK 66
           Y+++G N+ G++V+G++ A SE    D+L  + +     +  K +   VS+ +    RV 
Sbjct: 4   YKYRGRNAQGQQVTGELDAASENAAADQLLSRAVIPLEFRETKPRGEGVSVSSLFRRRVS 63

Query: 67  SKDITILTRQLATMLTTGVPIVQALKLVGDNHRKAEMKSILAQITKSVEAGTPLSKAMRT 126
            +++ I TRQ+ ++  +G+PI++A+  + +     +MK  L  I+  + AG PLS AM  
Sbjct: 64  LEELQIFTRQMYSLTRSGIPILRAIAGLSETTHSQQMKQALDDISVQLTAGRPLSSAMNH 123

Query: 127 ASAHFDTLYVDLVETGEMSGNLPEVFERLATYREKSEQLRAKVIKALIYPSMVVLVALGV 186
               FD L+V +V  GE +G L +VF +L+ Y E+ ++ R ++  A+ YP+ V L+A+ +
Sbjct: 124 HPEVFDALFVSMVHVGENTGKLEDVFLQLSGYLEREQETRRRIKSAVRYPTFV-LIAISL 182

Query: 187 SYLMLT-MVIPEFESMFKGFGAELPWFTQQVLKLSHWVQAYSLWAFIAIAAAIFGLKALR 245
           + ++L  MVIP+F  MF  FGAELPW T+ ++  S++   Y  W    +   + G  A  
Sbjct: 183 AMVILNIMVIPKFADMFSRFGAELPWATRILIATSNFFVNY-WWLLALLVVGLIGGLAYW 241

Query: 246 KNSFQIRLKTSRLGLKFPIIGNVLAKASIAKFSRTLATSFAAGIPILASLKTTAKTSGNV 305
             + Q   K  +  L  P +G+++ +++++++ R+ A    AG+P+  +L   A    N 
Sbjct: 242 HKTEQGEKKWDQWKLHMPAVGSIIERSTLSRYCRSFAMMMGAGVPMTQALSLVADAVDNA 301

Query: 306 HFETAINEVYRDTAAGMPMYIAMRNTEAFPEMVLQMVMIGEESGQLDDMLNKVATIYEFE 365
           +    I  + R   +G  M     +++ F  +VLQMV +GEE+GQL+ +LN  A  YE E
Sbjct: 302 YMHDKIVAMRRGIESGESMLRVSNHSKLFTPLVLQMVAVGEETGQLEQLLNDAADFYEGE 361

Query: 366 VDNTVDNLGKILEPLIIVFLGTVVGGLVVAMYLPIFNLMSVL 407
           VD  + NL   LEP++I  +  +V  L + +YLP++++++V+
Sbjct: 362 VDYDLKNLTAKLEPILIGIVAGIVLILALGIYLPMWDMLNVV 403