Pairwise Alignments

Query, 408 a.a., type IV pilin assembly protein PilC from Vibrio cholerae E7946 ATCC 55056

Subject, 414 a.a., type II secretory pathway, component PulF from Dechlorosoma suillum PS

 Score =  289 bits (740), Expect = 9e-83
 Identities = 153/394 (38%), Positives = 243/394 (61%), Gaps = 4/394 (1%)

Query: 14  WKGINSNGKKVSGQMLAISEIEVRDKLKDQHIQIKKLKKGSVSLLARLTHRVKSKDITIL 73
           W+G +  GK + G++ A SE  V+  L+ Q + + K+ K       ++T     KDIT+ 
Sbjct: 25  WEGKDKTGKIIRGELRATSETVVQATLRRQGVLVTKVSKQRFKSGGKIT----DKDITLF 80

Query: 74  TRQLATMLTTGVPIVQALKLVGDNHRKAEMKSILAQITKSVEAGTPLSKAMRTASAHFDT 133
           TRQLATM+ +GVP++QA  +VG  H    +  +L  I   VE G+ L++A R    +FD+
Sbjct: 81  TRQLATMMKSGVPLLQAFDIVGKGHSNPAVGKLLLDIKADVETGSALNQAFRKYPLYFDS 140

Query: 134 LYVDLVETGEMSGNLPEVFERLATYREKSEQLRAKVIKALIYPSMVVLVALGVSYLMLTM 193
           L+ +L+  GE +G L  + +RLA Y+EK   +++K+  AL YP  V++VA  ++ +++  
Sbjct: 141 LFCNLIGAGEQAGILDTLLDRLAIYKEKILAVKSKIKSALFYPIAVIVVAFCITAVIMIF 200

Query: 194 VIPEFESMFKGFGAELPWFTQQVLKLSHWVQAYSLWAFIAIAAAIFGLKALRKNSFQIRL 253
           VIP F+ +FK FGA+LP  T  V+ +S +  AY    F  +   I+      K S  +++
Sbjct: 201 VIPAFKEVFKSFGADLPAPTLVVIAISDFFVAYWYLIFGILGGGIYSFLESWKRSEAVQI 260

Query: 254 KTSRLGLKFPIIGNVLAKASIAKFSRTLATSFAAGIPILASLKTTAKTSGNVHFETAINE 313
              +  L+ PI G ++ K+ IA+++RTLAT FAAG+P++ +L +    SGN  ++ A  +
Sbjct: 261 AMDKALLRMPIFGPLIRKSVIARWTRTLATMFAAGVPLVEALDSVGGASGNHVYKMATRQ 320

Query: 314 VYRDTAAGMPMYIAMRNTEAFPEMVLQMVMIGEESGQLDDMLNKVATIYEFEVDNTVDNL 373
           +  + + G  +  +M+N   FP MV+QMV IGEESG LD ML+KVA  +E EVD++V  L
Sbjct: 321 IQSEVSTGTSLTNSMQNVNLFPNMVIQMVAIGEESGALDSMLSKVADFFEAEVDDSVAAL 380

Query: 374 GKILEPLIIVFLGTVVGGLVVAMYLPIFNLMSVL 407
             ++EP+I+V LG ++GG+VVAMYLPIF + SV+
Sbjct: 381 SSLMEPIIMVILGVLIGGMVVAMYLPIFKMGSVV 414