Pairwise Alignments

Query, 408 a.a., type IV pilin assembly protein PilC from Vibrio cholerae E7946 ATCC 55056

Subject, 409 a.a., type II secretion system protein from Marinobacter adhaerens HP15

 Score =  199 bits (505), Expect = 2e-55
 Identities = 112/376 (29%), Positives = 206/376 (54%), Gaps = 14/376 (3%)

Query: 29  LAISEIEVRDKLKDQHIQIKKLKKGSVSLLARLTHRVKSKDITILTRQLATMLTTGVPIV 88
           LAI E++  + + D+  ++   +K           +V   ++ +  RQ+  +   G+P++
Sbjct: 39  LAIREVQETESVIDRLNRLPIFRK-----------KVTLDELIVFCRQMHALTKAGIPLI 87

Query: 89  QALKLVGDNHRKAEMKSILAQITKSVEAGTPLSKAMRTASAHFDTLYVDLVETGEMSGNL 148
           + ++ + +  R   +  +L  +T  +E GT ++ AM+     F  L++ ++  GE +G L
Sbjct: 88  RTMRGLAETTRSPVLAEVLEDVTTRLEGGTTMATAMQAHPKVFSELFIAMIHVGENTGML 147

Query: 149 PEVFERLATYREKSEQLRAKVIKALIYPSMVVLVALGVSYLMLTMVIPEFESMFKGFGAE 208
            + F RL+   E     + ++ +A+ YP  V++  L    ++  +VIP+F S+F   GA+
Sbjct: 148 DDAFRRLSEILELERDTKRRLKQAMRYPMFVIIALLSALMIVNFLVIPKFASVFNKLGAD 207

Query: 209 LPWFTQQVLKLSHWVQAYSLWAFIAIAAAIFGLKALR-KNSFQIRLKTSRLGLKFPIIGN 267
           LP+ TQ ++  S+++ AY  W  +  A A  GL   + K + Q RL   R  LK PIIG 
Sbjct: 208 LPFLTQVLVGTSNFLLAY--WYVMLFAVAAGGLLLRQWKQTEQGRLTWDRYKLKLPIIGP 265

Query: 268 VLAKASIAKFSRTLATSFAAGIPILASLKTTAKTSGNVHFETAINEVYRDTAAGMPMYIA 327
           +L   ++++FSR  AT  +AG+P+  +L   A T+ N    + I ++      G  +   
Sbjct: 266 LLELITLSRFSRNFATMLSAGMPVTTALTVVADTTDNAWISSHIKDMRAGIERGESLLRT 325

Query: 328 MRNTEAFPEMVLQMVMIGEESGQLDDMLNKVATIYEFEVDNTVDNLGKILEPLIIVFLGT 387
            R++E F  ++LQM+ +GEE+G +DDMLN VA  Y+ +VD  +  L + +EP++IV +G 
Sbjct: 326 ARHSEMFTPLILQMIAVGEETGSVDDMLNNVADFYDEDVDYGLKRLAESIEPILIVAMGI 385

Query: 388 VVGGLVVAMYLPIFNL 403
           +V  L + ++LPI++L
Sbjct: 386 LVLILALGVFLPIWDL 401