Pairwise Alignments

Query, 408 a.a., type IV pilin assembly protein PilC from Vibrio cholerae E7946 ATCC 55056

Subject, 403 a.a., general secretion pathway protein F from Marinobacter adhaerens HP15

 Score =  189 bits (479), Expect = 2e-52
 Identities = 115/406 (28%), Positives = 213/406 (52%), Gaps = 15/406 (3%)

Query: 12  YRWKGINSNGKKVSGQMLAISEIEVRDKLKDQHIQI--------KKLKKGSVSLLARLTH 63
           Y +K ++S GK+  G + A +   VR +L+++ +          K+ +   +S    L  
Sbjct: 4   YEYKALDSRGKQKQGVVEADAPRAVRQQLRERGLTPLAVEPAAEKQTRSNPLSSRGSLA- 62

Query: 64  RVKSKDITILTRQLATMLTTGVPIVQALKLVGDNHRKAEMKSILAQITKSVEAGTPLSKA 123
              + D+ ++TRQLAT++ +G+PI QAL        K  ++S+L  I   V  G  L+ +
Sbjct: 63  ---AADLALVTRQLATLIQSGIPIEQALSAAAQQSPKPRIRSMLIAIRAKVMEGYTLADS 119

Query: 124 MRTASAHFDTLYVDLVETGEMSGNLPEVFERLATYREKSEQLRAKVIKALIYPSMVVLVA 183
           +      F  LY   V  GE +G+L  V  RLA Y E  ++ R K+  A IYP ++ +VA
Sbjct: 120 LGEFPRAFPRLYRSTVAAGEHAGHLDLVLNRLADYTENRQEARQKIQLAAIYPIILSIVA 179

Query: 184 LGVSYLMLTMVIPEFESMFKGFGAELPWFTQQVLKLSHWVQAYSLWAFIAIAAAIFGLK- 242
           + +   +LT V+P+   +F   G ELP  T  +L +S ++  Y ++ FI + AA+   + 
Sbjct: 180 IAIVVFLLTYVVPDIIDVFLKQGQELPTLTMAMLAVSEFLADYGVYLFILLVAALMVFRF 239

Query: 243 ALRKNSFQIRLKTSRLGLKFPIIGNVLAKASIAKFSRTLATSFAAGIPILASLKTTAKTS 302
            L K  F++R     L L  P+   ++   + A+++ TL+    +G+P++ +++   +  
Sbjct: 240 FLTKPGFRLRFHKRLLHL--PLFSGMVRGVNTARYASTLSILTTSGVPLVEAMRIAGEVL 297

Query: 303 GNVHFETAINEVYRDTAAGMPMYIAMRNTEAFPEMVLQMVMIGEESGQLDDMLNKVATIY 362
            N      + +  R  + G  ++ ++  T  FP M+L M+  GE SG+LD ML + A + 
Sbjct: 298 SNDFLRQELRDAARKVSEGGSLHRSLDQTGYFPPMMLHMIASGEASGELDSMLERTARMQ 357

Query: 363 EFEVDNTVDNLGKILEPLIIVFLGTVVGGLVVAMYLPIFNLMSVLG 408
           E  + + +  +  + EP++++ +G VV  +V+A+ LPI N+ +++G
Sbjct: 358 ENTLQSKIAAIVGLFEPMMLLVMGVVVLIIVLAIMLPILNMSNLVG 403