Pairwise Alignments

Query, 408 a.a., type IV pilin assembly protein PilC from Vibrio cholerae E7946 ATCC 55056

Subject, 406 a.a., MSHA biogenesis protein MshG (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  214 bits (545), Expect = 4e-60
 Identities = 125/401 (31%), Positives = 226/401 (56%), Gaps = 7/401 (1%)

Query: 12  YRWKGINSNGKKVSGQMLAISEIEVRDKLKDQHIQIKKLKKGSVSLLARLTHRVKSK--- 68
           Y+++G +  G+ V+GQ+ A SE    D L  + I   ++K   V+    LT    SK   
Sbjct: 4   YQYRGRSGQGQAVTGQLDAASESAAADMLLSRGIIPLEVKAAKVAKSFSLTQLFGSKVGL 63

Query: 69  -DITILTRQLATMLTTGVPIVQALKLVGDNHRKAEMKSILAQITKSVEAGTPLSKAMRTA 127
            ++ I TRQ+ ++  +G+PI++A+  + +      MK  L  I++ + AG PLS AM   
Sbjct: 64  DELQIFTRQMYSLTRSGIPILRAIAGLSETAHSQRMKDALNDISEQLTAGRPLSSAMNQH 123

Query: 128 SAHFDTLYVDLVETGEMSGNLPEVFERLATYREKSEQLRAKVIKALIYPSMVVLVALGVS 187
              FD+L+V +V  GE +G L + F +L+ Y E+ ++ R ++  A+ YP + VL+A+G++
Sbjct: 124 PDVFDSLFVSMVHVGENTGKLEDAFIQLSGYIEREQETRRRIKAAMRYP-IFVLIAIGLA 182

Query: 188 YLMLT-MVIPEFESMFKGFGAELPWFTQQVLKLSHWVQAYSLWAFIAIAAAIFGLKALRK 246
            ++L  MVIP+F  MF  FGA+LPW T+ ++  S+    Y     + +  AI G++    
Sbjct: 183 MVILNIMVIPKFAEMFSRFGADLPWATKVLIGTSNLFVNYWPLMLVMLLGAIIGIRYWH- 241

Query: 247 NSFQIRLKTSRLGLKFPIIGNVLAKASIAKFSRTLATSFAAGIPILASLKTTAKTSGNVH 306
           ++ +   +  +  L  P +G+++ ++++A++ R+ +   +AG+P+  +L   A    N +
Sbjct: 242 HTEKGEKQWDKWKLHIPAVGSIIERSTLARYCRSFSMMLSAGVPMTQALSLVADAVDNAY 301

Query: 307 FETAINEVYRDTAAGMPMYIAMRNTEAFPEMVLQMVMIGEESGQLDDMLNKVATIYEFEV 366
               I  + R   +G  M      ++ F  +VLQMV +GEE+GQ+D +LN  A  YE EV
Sbjct: 302 MHDKIVGMRRGIESGESMLRVSNQSKLFTPLVLQMVAVGEETGQIDQLLNDAADFYEGEV 361

Query: 367 DNTVDNLGKILEPLIIVFLGTVVGGLVVAMYLPIFNLMSVL 407
           D  + NL   LEP++I  +  +V  L + +YLP++++++V+
Sbjct: 362 DYDLKNLTAKLEPILIGIVAVIVLILALGIYLPMWDMLNVV 402