Pairwise Alignments

Query, 408 a.a., type IV pilin assembly protein PilC from Vibrio cholerae E7946 ATCC 55056

Subject, 394 a.a., Type II secretion system protein F from Enterobacter sp. TBS_079

 Score =  193 bits (490), Expect = 9e-54
 Identities = 112/392 (28%), Positives = 207/392 (52%), Gaps = 11/392 (2%)

Query: 12  YRWKGINSNGKKVSGQMLAISEIEVRDKLKDQHIQIKKLKKGSVSLLARLTHRVKSKDIT 71
           +RW+ ++  G+  SG + A       D+L  + +    + + +     R  HR +     
Sbjct: 7   WRWRALSVEGEPRSGALWATDRNAAFDRLMRKALHPLTITRCTQRYRWRPHHRYE----- 61

Query: 72  ILTRQLATMLTTGVPIVQALKLVGDNHRKAEMKSILAQITKSVEAGTPLSKAMRTASAHF 131
            +  QLAT+L  G+ +  +L+++ D H     +++L  +   +  G P S+A++   A F
Sbjct: 62  -VFHQLATLLQAGLTLSDSLQMLADQHPITPWQALLQSLADELSEGCPFSEALKRWPAVF 120

Query: 132 DTLYVDLVETGEMSGNLPEVFERLATYREKSEQLRAKVIKALIYPSMVVLVALGVSYLML 191
             LYV +V+TGE++G L      LA  +E  +QL AKV KA  YP +++ +A+ V   M+
Sbjct: 121 SPLYVSMVKTGELTGKLETCCRELAQQQESQQQLSAKVKKAQRYPMVILALAVIVVLAMV 180

Query: 192 TMVIPEFESMFKGFGAELPWFTQQVLKLSHWVQAYSLWAFIAIAAAIFGLKALRKNSFQI 251
           T+V+PEF +++K F   LP  TQ V+ ++ ++Q+Y+L  F  +   +    A R++    
Sbjct: 181 TLVLPEFAAIYKTFNTPLPMLTQIVMGMATFIQSYALALFAGVLLPVSIAWAWRQDP--- 237

Query: 252 RLKTSRLGLKFPIIGNVLAKASIAKFSRTLATSFAAGIPILASLKTTAKTSGNVHFETAI 311
             +   + L  P++G +     + +    L+ +  AGI  L  L++  +T  + +++  +
Sbjct: 238 --RWQHVLLHIPVMGALAKGQKLGQIFTVLSLTQQAGIAFLKGLESAEETVESRYWQGIL 295

Query: 312 NEVYRDTAAGMPMYIAMRNTEAFPEMVLQMVMIGEESGQLDDMLNKVATIYEFEVDNTVD 371
             +  D   G P++ + +    F  + +Q++  GE SG LD ML  +A  +  +   + D
Sbjct: 296 RAIREDIEKGYPLWASFQKAAVFTPLCIQLLRTGESSGALDIMLVNLARHHTEQTFQSAD 355

Query: 372 NLGKILEPLIIVFLGTVVGGLVVAMYLPIFNL 403
           NL  +LEP++++  G ++G LVVAMYLPIF+L
Sbjct: 356 NLAAVLEPVLLIVTGVIIGTLVVAMYLPIFHL 387