Pairwise Alignments

Query, 562 a.a., type IV-A pilus assembly ATPase PilB from Vibrio cholerae E7946 ATCC 55056

Subject, 472 a.a., General secretion pathway protein E from Pseudomonas fluorescens FW300-N2E2

 Score =  336 bits (861), Expect = 1e-96
 Identities = 203/470 (43%), Positives = 278/470 (59%), Gaps = 25/470 (5%)

Query: 93  QGNLLLLAVSDPTLLQAEEEFRFATGLQVELALADHRALQAAIRRLYGRSIQGAANQGKE 152
           +G +L++  S P    +E   +F     V L       L   +   Y  +   AA  G  
Sbjct: 21  EGAVLMVCPSTPGWSISEVRRQFGL---VRLERVRDEELDGLLNSAYADTGSAAAVVGAA 77

Query: 153 ISQDELANLVKVSDDELQSIEDL--SQDDSPVSRFINQVLLDAVRKGASDIHFEPYENQY 210
            ++ +L  L++    ++  I DL  +QD +PV R IN +L  A R  ASDIH EPYE+  
Sbjct: 78  ENEVDLDRLMQ----DIPEITDLLDTQDGAPVIRMINALLTQAARDEASDIHIEPYESHS 133

Query: 211 RIRLRCDGILVETQQPASHLSRRLAARIKILSKLDIAERRLPQDGRIKLRLSRDTAIDMR 270
            +R R DG L +   P   L   L +RIKI+++LDIAE+RLPQDGRI LR++    ID+R
Sbjct: 134 VVRYRVDGTLRDVVSPRKALHGALVSRIKIMAQLDIAEKRLPQDGRIALRVA-GRPIDIR 192

Query: 271 VSTLPTLWGEKIVLRLLDSSAANLDIDKLGYNPQQKQLYLNALKRPQGMILMTGPTGSGK 330
           VST+PT  GE++V+RLLD  A  L ++ LG +P       + +++P G++L+TGPTGSGK
Sbjct: 193 VSTVPTGHGERVVMRLLDKQAGRLQLETLGMDPDVLGKLDHLIRQPHGIVLVTGPTGSGK 252

Query: 331 TVSLYTGLRILNTSQINISTAEDPVEINLSGINQVQVQPKIGFGFAEALRSFLRQDPDVV 390
           T SLY  L  L+ S  NI T EDPVE +L GI+Q+QV  KI   FA ALR+ LRQDPD++
Sbjct: 253 TTSLYASLARLDASVHNILTVEDPVEYDLPGISQIQVNAKIDMTFALALRAILRQDPDII 312

Query: 391 MVGEIRDLETAEIAVKAAQTGHLVLSTLHTNSAAETVIRLANMGVEPFNLASSLSLIIAQ 450
           M+GEIRDLETA+IAV+A+ TGHLVL+TLHTN A   + RL +MGVEPF LASS+  ++AQ
Sbjct: 313 MIGEIRDLETAQIAVQASLTGHLVLATLHTNDAVSAINRLIDMGVEPFLLASSMLGVLAQ 372

Query: 451 RLARRLCKHCKIAVRPSALLQSQFAFQPNEILYEANAAGCNECT-GGYSGRVGIYEVMAF 509
           RL RRLC  CK   +P       +              GC  C   GYSGR GI+E+   
Sbjct: 373 RLVRRLCPQCK---QPDPATPGTW-----------RPVGCPSCNQTGYSGRTGIHELFCI 418

Query: 510 NTELAEAIMQRASIHQIERLAKANGMQTLQESGLEKLREGITSFAELQRV 559
           + ++   I Q A    +   A+  GM +++E G   +R G T+  E+ RV
Sbjct: 419 DDDIRTLIHQGAGEQALRAAARRAGMFSMREDGERWVRSGTTAPEEILRV 468