Pairwise Alignments

Query, 562 a.a., type IV-A pilus assembly ATPase PilB from Vibrio cholerae E7946 ATCC 55056

Subject, 566 a.a., Type IV fimbrial assembly, ATPase PilB from Pseudomonas fluorescens FW300-N2E2

 Score =  531 bits (1367), Expect = e-155
 Identities = 282/560 (50%), Positives = 376/560 (67%), Gaps = 4/560 (0%)

Query: 2   LTNLVAILRQAELISATQEQAVVTQVSASGTSVPEALLELSIFHAQELTEQLSHIFGLPE 61
           L+ L   L  AEL++    Q    Q   S   +   L++  +  ++++ E  S  FG+  
Sbjct: 6   LSGLTKQLVLAELLTEQSAQQAYQQAQRSRIPLVSYLVQNKLVQSRQVAEIASEHFGVAL 65

Query: 62  TDLSRYDYANLCQQLGLRELITRYDALPIAKQGNLLLLAVSDPTLLQAEEEFRFATGLQV 121
            DL+  D       L   +L+ ++ ALP+ ++GN L + +SDPT  QA  + +F+TGL  
Sbjct: 66  LDLNSLDKETQPSGLVSEKLVRQHHALPLWRRGNKLYVGISDPTNHQAINDIQFSTGLTT 125

Query: 122 ELALADHRALQAAIRRLYGRSIQGAANQGKEISQDELANLVKVSDDELQSIEDLSQDDSP 181
           E  L +   L  AI + +  S  G    G ++  D L ++  + D +  SI     DD+P
Sbjct: 126 EAILVEDNKLSDAIEKFFESSSTGLEGMG-DVDLDGL-DIESIDDSKQDSIGGQDTDDTP 183

Query: 182 VSRFINQVLLDAVRKGASDIHFEPYENQYRIRLRCDGILVETQQPASHLSRRLAARIKIL 241
           V RF+N++LLDA++ G+SD+HFEPYE  YR+R+R DGIL E  +P   L+ R+AAR+K++
Sbjct: 184 VVRFVNKMLLDAIKGGSSDLHFEPYEKIYRVRVRTDGILREVARPPIQLANRIAARLKVM 243

Query: 242 SKLDIAERRLPQDGRIKLRLSRDTAIDMRVSTLPTLWGEKIVLRLLDSSAANLDIDKLGY 301
           + LDI+ERR PQDGR+K+RLS+  +ID RV+TLPTLWGEK+V+R+LD S+A + ID LGY
Sbjct: 244 ASLDISERRKPQDGRLKMRLSKTKSIDFRVNTLPTLWGEKVVIRILDPSSAQMGIDALGY 303

Query: 302 NPQQKQLYLNALKRPQGMILMTGPTGSGKTVSLYTGLRILNTSQINISTAEDPVEINLSG 361
            P QK LY+ ALK+PQG+IL+TGPTGSGKTVSLYTGL ILNT  INISTAEDPVEIN+ G
Sbjct: 304 EPDQKDLYMAALKQPQGLILVTGPTGSGKTVSLYTGLNILNTVDINISTAEDPVEINMEG 363

Query: 362 INQVQVQPKIGFGFAEALRSFLRQDPDVVMVGEIRDLETAEIAVKAAQTGHLVLSTLHTN 421
           INQV V P+ G  FA+ALRSFLRQDPDV+MVGEIRDLETAEIA+KAAQTGHLVLSTLHTN
Sbjct: 364 INQVNVNPRQGLDFAQALRSFLRQDPDVIMVGEIRDLETAEIAIKAAQTGHLVLSTLHTN 423

Query: 422 SAAETVIRLANMGVEPFNLASSLSLIIAQRLARRLCKHCK--IAVRPSALLQSQFAFQPN 479
           SAAET+IRL NMG+  FN+A+++ LIIAQRLAR+LC HCK  I +    LL+  F  +  
Sbjct: 424 SAAETLIRLQNMGIPGFNIATAVHLIIAQRLARKLCSHCKKAIDIPEETLLKEGFPREHL 483

Query: 480 EILYEANAAGCNECTGGYSGRVGIYEVMAFNTELAEAIMQRASIHQIERLAKANGMQTLQ 539
                    GC +C  GY GRVG+YEV+    EL   IM   +  +I+   + +G   L+
Sbjct: 484 GTFTIYEPVGCEQCNNGYKGRVGVYEVVKNTPELQRLIMAEGNSLEIDLQMRKDGFNDLR 543

Query: 540 ESGLEKLREGITSFAELQRV 559
            SGL K+ +G+TS  E+ RV
Sbjct: 544 TSGLLKVMQGVTSLEEINRV 563