Pairwise Alignments

Query, 562 a.a., type IV-A pilus assembly ATPase PilB from Vibrio cholerae E7946 ATCC 55056

Subject, 483 a.a., General secretion pathway protein E from Pseudomonas fluorescens FW300-N2E2

 Score =  345 bits (885), Expect = 2e-99
 Identities = 204/468 (43%), Positives = 282/468 (60%), Gaps = 5/468 (1%)

Query: 93  QGNLLLLAVSDPTLLQAEEEFRFATGLQVELALADHRALQAAIRRLYGRSIQGAANQGKE 152
           +G  L L +   T L A  E R   G  + + + +     A +  +Y R  Q AA Q  +
Sbjct: 16  EGPTLSLVMRGDTPLTAVAEVRRLCGRDLPIQVLEPTLFAARLASVY-RQGQSAAEQVAQ 74

Query: 153 ISQDELANLVKVSDDELQSIEDLSQD-DSPVSRFINQVLLDAVRKGASDIHFEPYENQYR 211
              +EL +L+ ++D   Q+ + L Q  D+P+ R IN +L +AVR+ ASD+H E +E    
Sbjct: 75  GLDEEL-DLLSLADQMPQTTDLLEQQGDAPIIRLINALLSEAVREQASDVHLETFEQYLS 133

Query: 212 IRLRCDGILVETQQPASHLSRRLAARIKILSKLDIAERRLPQDGRIKLRLSRDTAIDMRV 271
           +R+R DG L E  +P   L+  L +RIK++++LDIAE+R+PQDGR+ LRL+    +D+RV
Sbjct: 134 VRMRIDGQLQEMLRPRRELANLLVSRIKVMARLDIAEKRVPQDGRMALRLAGHE-VDVRV 192

Query: 272 STLPTLWGEKIVLRLLDSSAANLDIDKLGYNPQQKQLYLNALKRPQGMILMTGPTGSGKT 331
           STLP+  GE++VLRLLD  A  LD+ +LG            L +P G++L+TGPTGSGKT
Sbjct: 193 STLPSAHGERVVLRLLDKQAGRLDLHRLGLPDDTLADLRLLLGKPHGIVLVTGPTGSGKT 252

Query: 332 VSLYTGLRILNTSQINISTAEDPVEINLSGINQVQVQPKIGFGFAEALRSFLRQDPDVVM 391
            SLY  L  +N    NI T EDP+E +L GI Q+ V PK+   FA  LR+ LRQDPDVVM
Sbjct: 253 TSLYAALSSINDQSRNILTVEDPIEYHLPGIGQMPVNPKVDMTFARGLRAILRQDPDVVM 312

Query: 392 VGEIRDLETAEIAVKAAQTGHLVLSTLHTNSAAETVIRLANMGVEPFNLASSLSLIIAQR 451
           VGEIRD ETAEIAV+A+ TGHLVLSTLHTN+A   V RL +MGV+ + LASSL+ I+AQR
Sbjct: 313 VGEIRDRETAEIAVQASLTGHLVLSTLHTNTAVGAVTRLVDMGVDAYLLASSLAGIVAQR 372

Query: 452 LARRLCKHCKIAVRPSALLQSQFAFQPNEILYEANAAGCNECTGGYSGRVGIYEVMAFNT 511
           L R LC  CK      A    +             A GC +C  GY GR GIYE++    
Sbjct: 373 LLRALCPSCKTPYVADAATCRRLGLDAGAAPRLFKAQGCEQCQKGYRGRFGIYELVNVGA 432

Query: 512 ELAEAIMQRASIHQIERLAKANGMQTLQESGLEKLREGITSFAELQRV 559
            L++ I Q A+   +   A+    ++L + G +++ EG+TS  EL R+
Sbjct: 433 ALSQLIHQGATEQALAAEARKTS-RSLFQDGRQRVLEGLTSVDELLRI 479