Pairwise Alignments

Query, 562 a.a., type IV-A pilus assembly ATPase PilB from Vibrio cholerae E7946 ATCC 55056

Subject, 594 a.a., Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB from Pseudomonas stutzeri RCH2

 Score =  306 bits (785), Expect = 1e-87
 Identities = 180/485 (37%), Positives = 276/485 (56%), Gaps = 16/485 (3%)

Query: 84  RYDALPIAKQGNLLLLAVSDPTLLQAEEEFRFATGLQVELALADHRALQAAIRRLY--GR 141
           R+  L +A   + + +A S P +   E          ++  +A+   +Q      Y   +
Sbjct: 110 RHSILAVAVDSSAVTIASSQPFMHGWEANLTHVLKRPIKRVVANPSDIQRFTVEFYRLAK 169

Query: 142 SIQGAANQGKEISQ----DELANLVKVSDDELQSIEDLSQDDSPVSRFINQVLLDAVRKG 197
           S+ GA+   ++IS     ++L NL   SD E  +      +DS +   ++ +   A ++ 
Sbjct: 170 SVSGASGTDQKISGAGNFEQLLNL-GASDQEPDA------NDSHIVNIVDWLFQYAFQQR 222

Query: 198 ASDIHFEPYENQYRIRLRCDGILVETQQPASHLSRRLAARIKILSKLDIAERRLPQDGRI 257
           ASDIH EP   Q  +R R DG+L    Q    ++  + +R+K L ++++AE+R PQDGR+
Sbjct: 223 ASDIHIEPRREQGSVRFRIDGVLHNVYQFPPQVTMAVVSRLKSLGRMNVAEKRKPQDGRV 282

Query: 258 KLRLSRDTAIDMRVSTLPTLWGEKIVLRLLDSSAANLDIDKLGYNPQQKQLYLNALKRPQ 317
           K +      +++R+STLPT +GEK+V+R+ D        D+LG++    + + +   +P 
Sbjct: 283 KTKTPDGGEVELRLSTLPTAFGEKMVMRIFDPEVLLKGFDQLGFSADDLRRWQSMTSQPN 342

Query: 318 GMILMTGPTGSGKTVSLYTGLRILNTSQINISTAEDPVEINLSGINQVQVQPKIGFGFAE 377
           G+IL+TGPTGSGKT +LYT L+ L T ++N+ T EDP+E+     NQ+QVQ  I   FA 
Sbjct: 343 GIILVTGPTGSGKTTTLYTTLKQLATPEVNVCTIEDPIEMIEGAFNQMQVQHNIELTFAS 402

Query: 378 ALRSFLRQDPDVVMVGEIRDLETAEIAVKAAQTGHLVLSTLHTNSAAETVIRLANMGVEP 437
            +R+ +RQDPD++MVGEIRDLETAE+A++AA TGHLVLSTLHTN A   + RL  +GV  
Sbjct: 403 GVRALMRQDPDIIMVGEIRDLETAEMAIQAALTGHLVLSTLHTNDAPSAITRLLELGVPH 462

Query: 438 FNLASSLSLIIAQRLARRLCKHCKIAVRPSALLQSQFAFQPNEIL--YEANAAGCNECTG 495
           + L ++L  ++AQRL R LC HCK  ++  A   S      N  L      A GC EC  
Sbjct: 463 YLLKATLLGVMAQRLVRTLCPHCKAPMQLDADDWSALTKPWNAPLPTTAQQAVGCLECRD 522

Query: 496 -GYSGRVGIYEVMAFNTELAEAIMQRASIHQIERLAKANGMQTLQESGLEKLREGITSFA 554
            G+ GR G+YE+M  N  +   I     I  + R A  +GM++L+ SG +K+  G+T+  
Sbjct: 523 TGFRGRAGVYEIMLLNDAIKPLITADTDIVALRRQAFKDGMRSLRLSGAQKIAAGLTTVE 582

Query: 555 ELQRV 559
           E+ RV
Sbjct: 583 EVLRV 587