Pairwise Alignments

Query, 562 a.a., type IV-A pilus assembly ATPase PilB from Vibrio cholerae E7946 ATCC 55056

Subject, 567 a.a., type IV-A pilus assembly ATPase PilB from Pseudomonas stutzeri RCH2

 Score =  510 bits (1314), Expect = e-149
 Identities = 278/560 (49%), Positives = 371/560 (66%), Gaps = 4/560 (0%)

Query: 2   LTNLVAILRQAELISATQEQAVVTQVSASGTSVPEALLELSIFHAQELTEQLSHIFGLPE 61
           L+ L   +  A ++     Q    Q   S T      ++  + + + + E  S  FG+  
Sbjct: 7   LSGLARQVVGAGVLDERTAQQAQAQALRSKTPFVTYAVQNRLVNGRVIAELASEQFGVAL 66

Query: 62  TDLSRYDYANLCQQLGLRELITRYDALPIAKQGNLLLLAVSDPTLLQAEEEFRFATGLQV 121
            DL   D   L + L   +L  ++  LP++K+G  L +A+SDP   Q+  + +F+TGL +
Sbjct: 67  LDLGALDKELLPKDLISEKLAKQHRVLPLSKRGTKLFIAISDPANHQSIADIQFSTGLSI 126

Query: 122 ELALADHRALQAAIRRLYGRSIQGAANQGKEISQDELANLVKVSDDELQSIEDLSQDDSP 181
           E  L +   L  AI +LY     G  + G ++  D + ++  VSDD        + DD+P
Sbjct: 127 EPILVEDDKLGEAIDKLYDNGSTGLEDLG-DVDLDGV-DVESVSDDGKGDEAGETADDAP 184

Query: 182 VSRFINQVLLDAVRKGASDIHFEPYENQYRIRLRCDGILVETQQPASHLSRRLAARIKIL 241
           V RF+N++LLDA+R G+SD+HFEPYE  +R+RLR DGIL E  +P   L+ R++AR+K++
Sbjct: 185 VVRFVNKMLLDAIRGGSSDLHFEPYEKAFRVRLRTDGILHEVARPPIQLAPRISARLKVM 244

Query: 242 SKLDIAERRLPQDGRIKLRLSRDTAIDMRVSTLPTLWGEKIVLRLLDSSAANLDIDKLGY 301
           + LDI+ERR PQDGRIK++LS++ AID RV+TLPTLWGEKIV+R+LD S+A + ID LGY
Sbjct: 245 AGLDISERRRPQDGRIKMKLSKNKAIDFRVNTLPTLWGEKIVMRILDPSSAQMGIDALGY 304

Query: 302 NPQQKQLYLNALKRPQGMILMTGPTGSGKTVSLYTGLRILNTSQINISTAEDPVEINLSG 361
              QK+LY+NALK+PQGMIL+TGPTGSGKTVSLYTGL ILNT  +NISTAEDPVEINL G
Sbjct: 305 EEDQKELYMNALKQPQGMILVTGPTGSGKTVSLYTGLNILNTVDVNISTAEDPVEINLEG 364

Query: 362 INQVQVQPKIGFGFAEALRSFLRQDPDVVMVGEIRDLETAEIAVKAAQTGHLVLSTLHTN 421
           INQV V P+ G  F++ALR+FLRQDPD++MVGEIRDLETAEIA+KAAQTGH+V+STLHTN
Sbjct: 365 INQVNVNPRQGMDFSQALRAFLRQDPDIIMVGEIRDLETAEIAIKAAQTGHMVMSTLHTN 424

Query: 422 SAAETVIRLANMGVEPFNLASSLSLIIAQRLARRLCKHCK--IAVRPSALLQSQFAFQPN 479
           SAAET+ RL NMGV  FN+A+S++LIIAQRLAR+LC  CK  + +   ALL   F     
Sbjct: 425 SAAETLTRLRNMGVAAFNIATSVNLIIAQRLARKLCNSCKKEVELPREALLGEGFPADKI 484

Query: 480 EILYEANAAGCNECTGGYSGRVGIYEVMAFNTELAEAIMQRASIHQIERLAKANGMQTLQ 539
                    GC+ C GGY GRVGIYEV+     LA  IM+  +   I    + +G   L+
Sbjct: 485 GAFKIYGPVGCDNCKGGYKGRVGIYEVVKNTPALARIIMEDGNSIDISTQMRKDGFNDLR 544

Query: 540 ESGLEKLREGITSFAELQRV 559
            S L K  +G+TS  E+ RV
Sbjct: 545 TSALVKAMQGVTSLEEVNRV 564