Pairwise Alignments

Query, 562 a.a., type IV-A pilus assembly ATPase PilB from Vibrio cholerae E7946 ATCC 55056

Subject, 499 a.a., General secretion pathway protein E from Xanthomonas campestris pv. campestris strain 8004

 Score =  332 bits (851), Expect = 2e-95
 Identities = 187/455 (41%), Positives = 269/455 (59%), Gaps = 9/455 (1%)

Query: 107 LQAEEEFRFATGLQVELALADHRALQAAIRRLYGRSIQGAANQGKEISQDELANLVKVSD 166
           +QA  E R   G+ +++           +  +Y         QG  +   +L   +    
Sbjct: 41  VQALIEVRRVLGVPLQVRTLAPAVFDRHVSEIYA---DAGLEQGMPVEALDLHGSLDSLI 97

Query: 167 DELQSIEDL-SQDDSPVSRFINQVLLDAVRKGASDIHFEPYENQYRIRLRCDGILVETQQ 225
           +++ + + L SQDD+P+ R IN ++ +A R GASD+H E YE++ R+RLR DG++ E   
Sbjct: 98  EDIPTADLLDSQDDAPIIRLINGIIAEAARLGASDVHLESYESRLRVRLRVDGVMREAAT 157

Query: 226 PASHLSRRLAARIKILSKLDIAERRLPQDGRIKLRLSRDTAIDMRVSTLPTLWGEKIVLR 285
               ++  L +R+K++++LDIAE+R+PQDGR+ L +    A+D+RVSTLPT   E++VLR
Sbjct: 158 LPGRIAPLLVSRVKVMARLDIAEKRIPQDGRVSLAMGAK-ALDVRVSTLPTRGSERVVLR 216

Query: 286 LLDSSAANLDIDKLGYNPQQKQLYLNALKRPQGMILMTGPTGSGKTVSLYTGLRILNTSQ 345
           +LD     L + +LG           AL+ P G++L+TGPTGSGKT +LY GL +LN   
Sbjct: 217 ILDKEQGTLSLTQLGMPAGVMGAVQRALQVPNGIVLVTGPTGSGKTTTLYAGLSLLNDGS 276

Query: 346 INISTAEDPVEINLSGINQVQVQPKIGFGFAEALRSFLRQDPDVVMVGEIRDLETAEIAV 405
            NI T EDPVE  + G+ Q QV  ++G  FA  LR+ LRQDPDVVM+GEIRD ETA+IAV
Sbjct: 277 RNILTIEDPVEYAIDGVGQTQVNARVGMTFAAGLRAILRQDPDVVMIGEIRDTETAQIAV 336

Query: 406 KAAQTGHLVLSTLHTNSAAETVIRLANMGVEPFNLASSLSLIIAQRLARRLCKHCKIAVR 465
           +A+ TGHLVLST+HTN A   V RL +MG+EPF LASSL LI+AQRL RRLC HC+    
Sbjct: 337 QASLTGHLVLSTVHTNDAVGAVTRLRDMGIEPFLLASSLRLILAQRLVRRLCTHCRTPRP 396

Query: 466 PSALLQSQFAFQPNEILYEANAAGCNEC-TGGYSGRVGIYEVMAFNTELAEAIMQRASIH 524
             A          + ++Y  +AAGC  C   GY+GR+GIYE +  +  +   I   A   
Sbjct: 397 LDAATTQMLGTSTDAVIY--SAAGCAACHHSGYAGRLGIYEAITVDDTVRRLIGDNADED 454

Query: 525 QIERLAKANGMQTLQESGLEKLREGITSFAELQRV 559
            +   A     + L ++    + +G+T+  E  RV
Sbjct: 455 ALAAAAFVRAPR-LGDAARAAVLQGVTTLEEALRV 488