Pairwise Alignments

Query, 562 a.a., type IV-A pilus assembly ATPase PilB from Vibrio cholerae E7946 ATCC 55056

Subject, 585 a.a., type II secretion system protein E (GspE) from Pseudomonas syringae pv. syringae B728a

 Score =  366 bits (939), Expect = e-105
 Identities = 228/565 (40%), Positives = 329/565 (58%), Gaps = 32/565 (5%)

Query: 8   ILRQAELISATQEQAVVTQVSASGTSVPEALLELSIFHAQELTEQLSHIFGLPETDLSRY 67
           ++  A L +A  E+A   Q  + GT +   L  L +    EL    + +   P   L+  
Sbjct: 34  LIENAGLKTADLERAQRLQQESEGTELLGLLTRLGLVSEFELARAWAALLQAPLL-LADA 92

Query: 68  DYANLCQQLGLRELITR-YDALPIAKQGNLLLLAVSDPTLLQAEEEFRFATGLQVELALA 126
               L     L E   R Y  +P+      L +  ++P  L   +   +A  + V L++ 
Sbjct: 93  VPPLLDPLPPLTERFMRHYQVVPVGWSDQGLQVLSANPGTLYPFQAIAYACEVPVRLSIG 152

Query: 127 DHRALQAAIRRLYGRSIQGAANQGKEISQDELANLVKVSDDELQSIEDLSQ-----DDSP 181
               ++  I R YG   QG +  G          L++  D+E  S+ED+        ++P
Sbjct: 153 PRNEVETLIERYYG---QGRSAMG---------TLIENLDEEGGSLEDIEHLKDLASEAP 200

Query: 182 VSRFINQVLLDAVRKGASDIHFEPYENQYRIRLRCDGILVETQQPASHLSRRLAARIKIL 241
           V R +N +L  AV + ASDIH EP+E+Q ++R R DG+L E + P S  S  + +R+KI+
Sbjct: 201 VIRLVNLILQRAVEQRASDIHIEPFESQLKVRYRIDGVLHEAEAPPSSSSAAVISRVKIM 260

Query: 242 SKLDIAERRLPQDGRIKLRLSRDTAIDMRVSTLPTLWGEKIVLRLLDSSAANLDIDKLGY 301
           ++LDIAERRLPQDGRI LR+ +   +D+RVST+PT +GE +V+RLLD    N D   LG+
Sbjct: 261 ARLDIAERRLPQDGRIMLRI-QGKELDLRVSTVPTSFGESVVMRLLDRQTINFDFPSLGF 319

Query: 302 NPQQKQLYLNALKRPQGMILMTGPTGSGKTVSLYTGLRILNTSQINISTAEDPVEINLSG 361
           + ++   +L+ L+RP G++L+TGPTGSGKT +LYT L  LNT++  I T EDPVE  L G
Sbjct: 320 DGERLDEFLDVLERPHGILLVTGPTGSGKTTTLYTALSRLNTAERKIITVEDPVEYQLEG 379

Query: 362 INQVQVQPKIGFGFAEALRSFLRQDPDVVMVGEIRDLETAEIAVKAAQTGHLVLSTLHTN 421
           INQ+QV+P IG  FA ALRS +RQDPDV+M+GE+RDLET  IA++++ TGHLVLSTLHTN
Sbjct: 380 INQIQVKPSIGLDFAGALRSIVRQDPDVIMIGEMRDLETCRIAIQSSLTGHLVLSTLHTN 439

Query: 422 SAAETVIRLANMGVEPFNLASSLSLIIAQRLARRLCKHCKIAV-RPSALLQ----SQFAF 476
           SAA ++ RL +MGVE + +AS+++ I+AQRL RRL    + A   P  L+      +F  
Sbjct: 440 SAAASITRLLDMGVESYLIASTVNGILAQRLVRRLDPATREAFDAPPELIAEHGLERFTD 499

Query: 477 QPNEILY--EANAAGCNECTGGYSGRVGIYEVMAFNTELAEAIMQRASIHQIERLAKANG 534
           +    LY   A+A G     GGY GR  I E++  N EL   +M+ A    +E  A+  G
Sbjct: 500 ERPIRLYRPRADAPG-----GGYRGRSAITELLVMNEELRSLLMRHADASTLEEAARRGG 554

Query: 535 MQTLQESGLEKLREGITSFAELQRV 559
           ++TL E GL +   G+TS  E+ RV
Sbjct: 555 LRTLHEEGLRQAVAGVTSLEEVLRV 579