Pairwise Alignments

Query, 562 a.a., type IV-A pilus assembly ATPase PilB from Vibrio cholerae E7946 ATCC 55056

Subject, 564 a.a., type II secretion system protein E:General secretory system II, protein E, N-terminal from Pseudomonas syringae pv. syringae B728a

 Score =  529 bits (1362), Expect = e-154
 Identities = 287/562 (51%), Positives = 378/562 (67%), Gaps = 8/562 (1%)

Query: 1   MLTNLVAILRQAELISATQEQAVVTQVSASGTSVPEALLELSIFHAQELTEQLSHIFGLP 60
           +LT L   L  AEL++    Q    Q      S+   L++  +  +  L E  S  FG+P
Sbjct: 5   VLTGLAKQLVLAELLTEPVAQQAYQQARRDKISLVSYLVQHKLVKSLTLAELASDQFGVP 64

Query: 61  ETDLSRYDYANLCQQLGLRELITRYDALPIAKQGNLLLLAVSDPTLLQAEEEFRFATGLQ 120
             DL+  D  +L + L   +L+ ++ ALP+ ++GN L + +SDPT  QA  E +F+TGL 
Sbjct: 65  FMDLASLDKESLPKGLVSEKLVRQHHALPLWRRGNKLFIGISDPTNHQAVTEIQFSTGLN 124

Query: 121 VELALADHRALQAAIRRLYGRSIQGAANQGKEISQDELANLVKVSDDELQSIEDLSQ-DD 179
            E  L +   L  AI R +  S  G  N    +   +L   ++ +D +  ++   +  DD
Sbjct: 125 TEAILVEDDKLTVAIDRFFD-SDSGLGN----LEDVDLGLDIEPADGKETTLATQNDADD 179

Query: 180 SPVSRFINQVLLDAVRKGASDIHFEPYENQYRIRLRCDGILVETQQPASHLSRRLAARIK 239
           +PV RF+N++L+DA+R G+SD+HFEPYE  +R+RLR DGIL E  +P  HL+ R+AAR+K
Sbjct: 180 APVVRFVNKMLMDAIRLGSSDLHFEPYEKIFRVRLRTDGILHEVARPPIHLANRIAARLK 239

Query: 240 ILSKLDIAERRLPQDGRIKLRLSRDTAIDMRVSTLPTLWGEKIVLRLLDSSAANLDIDKL 299
           +++ LDI+ERR PQDGR+KLR+S+  AID R++TLPTLWGEKIV+R+LD ++A + ID L
Sbjct: 240 VMASLDISERRKPQDGRVKLRVSKTKAIDFRMNTLPTLWGEKIVMRILDPTSAQMGIDAL 299

Query: 300 GYNPQQKQLYLNALKRPQGMILMTGPTGSGKTVSLYTGLRILNTSQINISTAEDPVEINL 359
           GY P QK LYL ALK PQGMIL+TGPTGSGKTVSLYTGL ILNT  INISTAEDPVEINL
Sbjct: 300 GYEPDQKALYLEALKLPQGMILVTGPTGSGKTVSLYTGLNILNTVDINISTAEDPVEINL 359

Query: 360 SGINQVQVQPKIGFGFAEALRSFLRQDPDVVMVGEIRDLETAEIAVKAAQTGHLVLSTLH 419
            GINQV V P+ G  F++ALR+FLRQDPDV+MVGEIRDLETAEIA+KA+QTGH+VLSTLH
Sbjct: 360 EGINQVNVNPRQGLDFSQALRAFLRQDPDVIMVGEIRDLETAEIAIKASQTGHMVLSTLH 419

Query: 420 TNSAAETVIRLANMGVEPFNLASSLSLIIAQRLARRLCKHCK--IAVRPSALLQSQFAFQ 477
           TNSAAET+ RL +MGV  FN+A++++LIIAQRLAR+LC HCK  + +    L+Q  F   
Sbjct: 420 TNSAAETLTRLHHMGVAAFNIATAINLIIAQRLARKLCSHCKKELDIPRETLIQEGFPEA 479

Query: 478 PNEILYEANAAGCNECTGGYSGRVGIYEVMAFNTELAEAIMQRASIHQIERLAKANGMQT 537
                      GC  C GGY GRVGIYEV+    EL   IM+  +  +I R  + +G   
Sbjct: 480 KIGTFKVYGPVGCEHCNGGYRGRVGIYEVVKKTPELERIIMEEGNSLEISRQMRKDGFND 539

Query: 538 LQESGLEKLREGITSFAELQRV 559
           L+ SGL K  +GITS  E+ RV
Sbjct: 540 LRTSGLSKAMQGITSLEEVNRV 561