Pairwise Alignments

Query, 562 a.a., type IV-A pilus assembly ATPase PilB from Vibrio cholerae E7946 ATCC 55056

Subject, 594 a.a., type II secretion system protein E:General secretory system II, protein E, N-terminal from Pseudomonas syringae pv. syringae B728a

 Score =  304 bits (779), Expect = 6e-87
 Identities = 170/487 (34%), Positives = 278/487 (57%), Gaps = 20/487 (4%)

Query: 84  RYDALPIAKQGNLLLLAVSDPTLLQAEEEFRFATGLQVELALADHRALQAAIRRLY--GR 141
           R+  L +A     + +A + P +   E +      LQ++  +A+   +Q      +   +
Sbjct: 110 RHKILAVAVDRESVTIASAQPYVRSWEADLAHVLKLQIKRVVANPADIQRMAMEFFRLAK 169

Query: 142 SIQGA-ANQGKEISQDELANLVKVSDDELQSIEDLSQDDSPVSRFINQVLLDAVRKGASD 200
           S+ GA A++ K  +      L+K+   +    ++   +D+ +   ++ +   A ++ ASD
Sbjct: 170 SVSGASASEQKMSNMGNFEQLLKLGASD----QEPDANDAHIVNIVDWLFQYAFQQRASD 225

Query: 201 IHFEPYENQYRIRLRCDGILVETQQPASHLSRRLAARIKILSKLDIAERRLPQDGRIKLR 260
           IH EP   Q  +R R DG+L    Q  + +   + +R+K L ++++AE+R PQDGR+K  
Sbjct: 226 IHIEPRREQGTVRFRIDGVLHNVYQFPAQVIMAIVSRLKSLGRMNVAEKRKPQDGRVKTT 285

Query: 261 LSRDTAIDMRVSTLPTLWGEKIVLRLLDSSAANLDIDKLGYNPQQKQLYLNALKRPQGMI 320
              +  +++R+STLPT +GEK+V+R+ D      D D+LG++    + +    ++P G+I
Sbjct: 286 TPENREVELRLSTLPTAFGEKMVMRIFDPEVLLKDFDQLGFSSDDLRRWQEMTRQPNGII 345

Query: 321 LMTGPTGSGKTVSLYTGLRILNTSQINISTAEDPVEINLSGINQVQVQPKIGFGFAEALR 380
           L+TGPTGSGKT +LYT L+ L TS++N+ T EDP+E+     NQ+QVQ  I   FA  +R
Sbjct: 346 LVTGPTGSGKTTTLYTTLKKLATSEVNLCTIEDPIEMVEPAFNQMQVQHNIDLSFAAGVR 405

Query: 381 SFLRQDPDVVMVGEIRDLETAEIAVKAAQTGHLVLSTLHTNSAAETVIRLANMGVEPFNL 440
           + +RQDPD++M+GEIRDLETAE+A++AA TGHLVLSTLHTN A   + R+  +GV  + L
Sbjct: 406 ALMRQDPDIIMIGEIRDLETAEMAIQAALTGHLVLSTLHTNDAPSAISRMLELGVPHYLL 465

Query: 441 ASSLSLIIAQRLARRLCKHCKIAVRPSALLQSQFAFQPNEILYEA-------NAAGCNEC 493
            +++  ++AQRL R LC HCK  +       ++  +Q     ++A        A GC EC
Sbjct: 466 KATILGVMAQRLVRTLCPHCKAPIN-----LNETDWQTLTRPWQAPVPPGAHQAVGCVEC 520

Query: 494 TG-GYSGRVGIYEVMAFNTELAEAIMQRASIHQIERLAKANGMQTLQESGLEKLREGITS 552
              GY GR G+YE+M  +  +   I     +  + R A   G ++L+ SG +K+  G+T+
Sbjct: 521 RDTGYRGRAGVYEIMVMSDNIKALISADLDLTAMRRQAFKEGTRSLRLSGAQKVSAGLTT 580

Query: 553 FAELQRV 559
             E+ RV
Sbjct: 581 LEEVLRV 587