Pairwise Alignments

Query, 562 a.a., type IV-A pilus assembly ATPase PilB from Vibrio cholerae E7946 ATCC 55056

Subject, 497 a.a., general secretion pathway protein GspE from Klebsiella michiganensis M5al

 Score =  343 bits (880), Expect = 9e-99
 Identities = 206/467 (44%), Positives = 284/467 (60%), Gaps = 19/467 (4%)

Query: 99  LAVSDPTLLQAEEEFRFATGLQVELALADHRALQAAIRRLYGRSIQGA----ANQGKEIS 154
           LAV+ P   QA  E R    +   L   +  A +  +   Y R    A    A+ G E+ 
Sbjct: 35  LAVTAP---QALLEARRVAAMPFRLERLEEEAFEKLLVLSYQRDSAEARRMMADIGNELD 91

Query: 155 QDELANLVKVSDDELQSIEDLSQDDSPVSRFINQVLLDAVRKGASDIHFEPYENQYRIRL 214
              LA  +  +DD L S     +DD+P+ R IN +L +A+++ ASDIH E YE   +IR 
Sbjct: 92  LYTLAEELPDTDDLLDS-----EDDAPIIRLINAMLTEAIKEKASDIHIETYERHLQIRF 146

Query: 215 RCDGILVETQQPASHLSRRLAARIKILSKLDIAERRLPQDGRIKLRLSRDTAIDMRVSTL 274
           R DG+L E  +P   L+  L +RIK+++ LDIAE+R+PQDGR+ LR+    A+D+RVSTL
Sbjct: 147 RVDGVLREILRPQRRLAALLISRIKVMASLDIAEKRIPQDGRMALRIG-GRAVDVRVSTL 205

Query: 275 PTLWGEKIVLRLLDSSAANLDIDKLGYNPQQKQLYLNALKRPQGMILMTGPTGSGKTVSL 334
           P+ +GE++VLRLLD ++ NLD+  LG  P   +     + RP G++L+TGPTGSGK+ +L
Sbjct: 206 PSSYGERVVLRLLDKNSVNLDLLTLGMTPALLRQVDGLIARPHGIVLVTGPTGSGKSTTL 265

Query: 335 YTGLRILNTSQINISTAEDPVEINLSGINQVQVQPKIGFGFAEALRSFLRQDPDVVMVGE 394
           Y  L  L+  + NI T EDP+E  L GI Q QV  K+   FA  LR+ LRQDPDVV+VGE
Sbjct: 266 YAALSRLDARERNIMTIEDPIEYELEGIGQTQVNAKVDMTFARGLRAILRQDPDVVLVGE 325

Query: 395 IRDLETAEIAVKAAQTGHLVLSTLHTNSAAETVIRLANMGVEPFNLASSLSLIIAQRLAR 454
           IRD ETA+IAV+A+ TGHLVLSTLHTNSA   + RL +MGVEPF L++SL  +++QRL R
Sbjct: 326 IRDGETAQIAVQASLTGHLVLSTLHTNSALGAISRLQDMGVEPFLLSTSLLAVMSQRLVR 385

Query: 455 RLCKHCKIAVRPSALLQSQFAFQPNEILYEANAAGCNEC-TGGYSGRVGIYEVMAFNTEL 513
           RLC HC+     +A    Q    P   L++    GC EC   GY GR GI+E++  +  +
Sbjct: 386 RLCPHCRQQEPANADTAHQMEIAPGTALWQPR--GCAECGFTGYRGRTGIHELLLVDDRV 443

Query: 514 AEAIMQ-RASIHQIERLAKANGMQTLQESGLEKLREGITSFAELQRV 559
             AI +    +  I++L       TL+ +G EK   GITS+ E+ RV
Sbjct: 444 RMAIHRGENEVTLIQQL--GTDYMTLRRAGREKALAGITSWQEVLRV 488