Pairwise Alignments

Query, 562 a.a., type IV-A pilus assembly ATPase PilB from Vibrio cholerae E7946 ATCC 55056

Subject, 461 a.a., type II secretion system protein GspE from Klebsiella michiganensis M5al

 Score =  355 bits (912), Expect = e-102
 Identities = 206/480 (42%), Positives = 288/480 (60%), Gaps = 33/480 (6%)

Query: 81  LITRYDALPIAKQGNLLLLAVSDPTLLQAEEEFRFATGLQVELALADHRALQAAIRRLYG 140
           L  RY AL +    + + +AV D    +  E  RFAT  ++++                 
Sbjct: 9   LCQRYKALLLDSDEHTIAIAVVDAPAPELMEALRFATQKRIDIECW-------------- 54

Query: 141 RSIQGAANQGKEISQDELANLVKVSDDELQSIEDLSQDDSPVSRFINQVLLDAVRKGASD 200
                        SQD +    ++    + ++    +  + V   +N +L  A+R+ ASD
Sbjct: 55  -------------SQDRMDK--RLQTPGISTLAPPVEASASVVEQVNNLLEQALRQRASD 99

Query: 201 IHFEPYENQYRIRLRCDGILVETQQPASHLSRRLAARIKILSKLDIAERRLPQDGRIKLR 260
           IH EP +++ RIRLR DG+L      A+ L+  + AR+K+L  LDIAE R+PQDG+  L 
Sbjct: 100 IHIEPGDDRLRIRLRVDGVLHSLAPLAAELAAPITARLKVLGNLDIAEHRVPQDGQFTLT 159

Query: 261 LSRDTAIDMRVSTLPTLWGEKIVLRLLDSSAANLDIDKLGYNPQQKQLYLNALKRPQGMI 320
           LS +  I  R++TLP   GEKIVLRLL      LD++ LG + QQ   + +AL +PQG++
Sbjct: 160 LS-ERPISFRIATLPCRGGEKIVLRLLHQVEQALDLEALGLSSQQLAAFRSALNQPQGLM 218

Query: 321 LMTGPTGSGKTVSLYTGLRILNTSQINISTAEDPVEINLSGINQVQVQPKIGFGFAEALR 380
           L+TGPTGSGKTV+LY+ L+  N  ++NI + EDP+EI + G+NQ Q+ P+ G  F   LR
Sbjct: 219 LVTGPTGSGKTVTLYSALQARNRDEVNICSVEDPLEIPIVGMNQTQINPRAGLTFHSVLR 278

Query: 381 SFLRQDPDVVMVGEIRDLETAEIAVKAAQTGHLVLSTLHTNSAAETVIRLANMGVEPFNL 440
           + LRQDPD+VMVGEIRD ETAEIA+KAAQTGHLVLSTLHTNS +ET++RL  MGV  + +
Sbjct: 279 ALLRQDPDIVMVGEIRDAETAEIAIKAAQTGHLVLSTLHTNSTSETLVRLQQMGVARWMI 338

Query: 441 ASSLSLIIAQRLARRLCKHCKIAVRPSALLQSQFAFQPNEILYEANAAGCNECTGGYSGR 500
           +S+LSL++AQRL R+LC HC+     SA      +  P   L    A GC  C  GY GR
Sbjct: 339 SSALSLVVAQRLVRKLCPHCRRETGSSA--DVPHSLWP-RALPRWQAPGCQHCYHGYYGR 395

Query: 501 VGIYEVMAFNTELAEAIMQRASIHQIERLAKANGMQTLQESGLEKLREGITSFAELQRVL 560
           + ++E++  NT L +AI Q  S  +IE LA+ +GM TL ESG   +  G+TS  E+ RVL
Sbjct: 396 LALFELLPVNTTLRQAITQGLSAGEIESLARESGMMTLFESGCLAVERGMTSLEEVVRVL 455