Pairwise Alignments

Query, 562 a.a., type IV-A pilus assembly ATPase PilB from Vibrio cholerae E7946 ATCC 55056

Subject, 495 a.a., general secretion pathway protein E from Burkholderia phytofirmans PsJN

 Score =  346 bits (888), Expect = 1e-99
 Identities = 198/433 (45%), Positives = 274/433 (63%), Gaps = 21/433 (4%)

Query: 131 LQAAIRRLYGRSIQGAANQGKEISQD-ELANLVKVSDDELQSIEDL--SQDDSPVSRFIN 187
           L  AI + Y R    AA    E+  + +L+ L++    ++  +EDL  S+DD+P+ R IN
Sbjct: 76  LTQAINQAYARQDGSAAQVVGEVEGEVDLSRLMQ----DIPEVEDLLESEDDAPIIRMIN 131

Query: 188 QVLLDAVRKGASDIHFEPYENQYRIRLRCDGILVETQQPASHLSRRLAARIKILSKLDIA 247
            +L  A R+ ASDIH EP+E    +R R DG L +  +P   L   L +RIKI+++LDIA
Sbjct: 132 ALLTQAAREQASDIHIEPFETSSVVRFRVDGTLRDVVRPKKALHGALISRIKIMAQLDIA 191

Query: 248 ERRLPQDGRIKLRLSRDTAIDMRVSTLPTLWGEKIVLRLLDSSAANLDIDKLGYNPQQKQ 307
           E+RLPQDGRI LR+     +D+RVSTLPT  GE+ VLRLL+  A+ L+++ LG       
Sbjct: 192 EKRLPQDGRITLRVG-GRPVDVRVSTLPTGHGERAVLRLLEKDASRLNLEALGMASDTLG 250

Query: 308 LYLNALKRPQGMILMTGPTGSGKTVSLYTGLRILNTSQINISTAEDPVEINLSGINQVQV 367
            +   + RP G++L+TGPTGSGKT +LY  +  L T+  NI T EDP+E +LSGI Q QV
Sbjct: 251 KFDKLIGRPHGIVLVTGPTGSGKTTTLYAAMSRLETATTNIMTVEDPIEYDLSGIGQTQV 310

Query: 368 QPKIGFGFAEALRSFLRQDPDVVMVGEIRDLETAEIAVKAAQTGHLVLSTLHTNSAAETV 427
             +IG  FA ALRS LRQDPDV+M+GEIRDLETA+IAV+A+ TGHLVL+TLHTN AA  V
Sbjct: 311 NERIGMTFARALRSILRQDPDVIMIGEIRDLETAQIAVQASLTGHLVLATLHTNDAASAV 370

Query: 428 IRLANMGVEPFNLASSLSLIIAQRLARRLCKHCKIAVRPSALLQSQFAFQPNEILYEANA 487
            RL +MGVEP+ LASSL  ++AQRL RRLC  C+           +   +   + Y  + 
Sbjct: 371 TRLTDMGVEPYLLASSLLGVLAQRLVRRLCPICR----------EERVEEDGSVRY--HP 418

Query: 488 AGCNEC-TGGYSGRVGIYEVMAFNTELAEAIMQRASIHQIERLAKANGMQTLQESGLEKL 546
            GC+ C   GY+GR G+YE++  + ++   + + A+  +I    +A GM+TL+E     L
Sbjct: 419 VGCDRCGHSGYAGRRGVYELLLIDDDIRTLVHRNAADAEILAAGRAQGMRTLREDADRWL 478

Query: 547 REGITSFAELQRV 559
             G+TS  E+ RV
Sbjct: 479 ASGLTSLEEVIRV 491