Pairwise Alignments

Query, 562 a.a., type IV-A pilus assembly ATPase PilB from Vibrio cholerae E7946 ATCC 55056

Subject, 569 a.a., type IV-A pilus assembly ATPase PilB (RefSeq) from Shewanella sp. ANA-3

 Score =  550 bits (1417), Expect = e-161
 Identities = 294/554 (53%), Positives = 388/554 (70%), Gaps = 8/554 (1%)

Query: 14  LISATQEQAVVTQVSASGTSVPEALLELSIFHAQELTEQLSHIFGLPETDLSRYDYANLC 73
           L++  Q  + +T+   +  ++   L++  +  A+ + E     +G P  DL+ +D + + 
Sbjct: 19  LLNEEQMASAITKSRQNKQTLVTTLVQTKLVSARSIAELCYEEYGTPLLDLAEFDVSAIP 78

Query: 74  QQLGLRELITRYDALPIAKQGNLLLLAVSDPTLLQAEEEFRFATGLQVELALADHRALQA 133
           ++   ++LI ++  LP+ K+GN L +A SDPT + A EEF+F+ GL  E  L +   L  
Sbjct: 79  EEFLNKKLIEKHRCLPLFKRGNRLYIATSDPTNIAALEEFQFSAGLHAEAILVEEDKLAK 138

Query: 134 AIRRLYGRSIQGAANQGKEISQDELANLVKVSDDELQSIEDLSQ--DDSPVSRFINQVLL 191
           A+ ++    I G    G +  +  LA  ++V+D + +  E+  +  DD+P+  +IN++L 
Sbjct: 139 ALEKVLEEDITGLDLSGMD--EAALAG-IEVTDTDKRQEENAGEASDDAPIVIYINKILT 195

Query: 192 DAVRKGASDIHFEPYENQYRIRLRCDGILVETQQPASHLSRRLAARIKILSKLDIAERRL 251
           DA+RKGASD+HFEPYE +YRIR R DGIL E  +P   L+ RL+AR+K++SKLDIAERR+
Sbjct: 196 DAIRKGASDLHFEPYEKRYRIRFRIDGILHEVSEPPISLAGRLSARLKVMSKLDIAERRV 255

Query: 252 PQDGRIKLRLSRDTAIDMRVSTLPTLWGEKIVLRLLDSSAANLDIDKLGYNPQQKQLYLN 311
           PQDGRIK++LSR  +ID RVSTLPTLWGEKIV+R+LDSS+A L I+KLGY P Q++LYL 
Sbjct: 256 PQDGRIKMKLSRTKSIDFRVSTLPTLWGEKIVMRILDSSSAQLGIEKLGYEPDQEKLYLE 315

Query: 312 ALKRPQGMILMTGPTGSGKTVSLYTGLRILNTSQINISTAEDPVEINLSGINQVQVQPKI 371
            L +PQGMIL+TGPTGSGKTVSLYTGL ILNT++ NISTAEDPVEINL G+NQV +  K 
Sbjct: 316 MLAKPQGMILVTGPTGSGKTVSLYTGLNILNTAERNISTAEDPVEINLEGVNQVHINLKA 375

Query: 372 GFGFAEALRSFLRQDPDVVMVGEIRDLETAEIAVKAAQTGHLVLSTLHTNSAAETVIRLA 431
           G  FA ALRSFLRQDPDVVMVGEIRDLETAEIA+KAAQTGHLVLSTLHTNSAAET+ RL 
Sbjct: 376 GLTFASALRSFLRQDPDVVMVGEIRDLETAEIAIKAAQTGHLVLSTLHTNSAAETLTRLI 435

Query: 432 NMGVEPFNLASSLSLIIAQRLARRLCKHCKIAVRPSALLQSQFAFQPNEI---LYEANAA 488
           NMGV  +N+ASS++LIIAQRLARRLC  CK A +       +  F   +I          
Sbjct: 436 NMGVPGYNIASSVNLIIAQRLARRLCTECKQAEQIPEHELQRLGFTDEQIAQGFTTFKPV 495

Query: 489 GCNECTGGYSGRVGIYEVMAFNTELAEAIMQRASIHQIERLAKANGMQTLQESGLEKLRE 548
           GC  C+GGY GRVGIYEVM  + E+A  IM+  +  QI   AKA GM+ L++SGL K+ +
Sbjct: 496 GCEHCSGGYKGRVGIYEVMKMSDEIARTIMEGGNSLQIADQAKAQGMRDLRQSGLLKVLQ 555

Query: 549 GITSFAELQRVLYF 562
           G+TS AE+ RV  F
Sbjct: 556 GVTSIAEINRVTSF 569