Pairwise Alignments

Query, 153 a.a., prepilin-type cleavage/methylation domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 139 a.a., Type IV pilin PilA from Pseudomonas fluorescens FW300-N2E2

 Score = 89.0 bits (219), Expect = 3e-23
 Identities = 53/145 (36%), Positives = 70/145 (48%), Gaps = 12/145 (8%)

Query: 8   QQKGFTLIELMIVVAVIGVLAAIAIPQYQNYVKKSAIGVGLANITALKTNIEDYIATEGS 67
           +Q GFTLIEL+IVVA+IG+LA  A+PQY  Y  ++    GLA ++ALK   ED +     
Sbjct: 3   KQSGFTLIELLIVVAIIGILATFALPQYSKYQARAKATAGLAEVSALKVPFEDVM----- 57

Query: 68  FPATTAGTAAGFTRLGTVEDMGDGKIVIAPTASGALGGTIKYTF--DAGVVSSSKIQLAR 125
                 GT      +G      +  +  + TA+    GTI  T       V    I L R
Sbjct: 58  ----NQGTNPSLANIGGTSPTSNCTLTASGTAADG-AGTIACTLLNAPAPVLGKAITLTR 112

Query: 126 DANGLWTCSTTVTSEIAPKGCTAGA 150
              G+WTC +T   E  P GCT  A
Sbjct: 113 STQGVWTCGSTAAQEFLPAGCTGAA 137