Pairwise Alignments

Query, 153 a.a., prepilin-type cleavage/methylation domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 140 a.a., Type IV pilin PilA from Pseudomonas fluorescens FW300-N1B4

 Score = 99.0 bits (245), Expect = 3e-26
 Identities = 63/147 (42%), Positives = 77/147 (52%), Gaps = 14/147 (9%)

Query: 7   KQQKGFTLIELMIVVAVIGVLAAIAIPQYQNYVKKSAIGVGLANITALKTNIEDYIATEG 66
           K QKGFTLIEL+IVVA+IG+LA  A+PQY  Y  ++ +   LA I+ALK   ED I    
Sbjct: 2   KNQKGFTLIELLIVVAIIGILATFALPQYSKYQARAKVTAALAEISALKVPFEDII---- 57

Query: 67  SFPATTAGTAAGFTRLGTVEDMGDGKIVIAPTA---SGALGGTIKYTFDAGVVSSSKIQL 123
                  GT      +G     G+  I  + TA   +G +G TI      G V S  I L
Sbjct: 58  -----NQGTNPTLALIGGTATTGNCTITASGTAADGAGTIGCTILNA--PGPVLSKTITL 110

Query: 124 ARDANGLWTCSTTVTSEIAPKGCTAGA 150
            R   G WTC+TT   E APKGCT  A
Sbjct: 111 TRTLAGGWTCATTAEQEYAPKGCTGVA 137