Pairwise Alignments

Query, 153 a.a., prepilin-type cleavage/methylation domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 144 a.a., pilin polypeptide PilA-like from Synechococcus elongatus PCC 7942

 Score = 49.3 bits (116), Expect = 3e-11
 Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 15/121 (12%)

Query: 2   KAYKNKQQKGFTLIELMIVVAVIGVLAAIAIPQYQNYVK-------KSAIGVGLANITAL 54
           K  + +++KGFTL+EL++V+ ++G+LAA+A+P   +          KSA+G  L  ++A 
Sbjct: 17  KDEQGEEEKGFTLVELLVVIIIVGILAAVALPNLLDQTDKAYASEGKSAVGAALRTLSA- 75

Query: 55  KTNIEDYIATEGSFPATTAGTAAGFTRL-----GTVEDMGDGKIVIAPTASGALGGTIKY 109
              ++    T  S      G++AG   +       V   G GK       +G +G   K+
Sbjct: 76  -ATLDPNYVTNASCTQLGIGSSAGNFNITCGNASQVTAAGSGKAANI-NVTGTIGTDGKF 133

Query: 110 T 110
           T
Sbjct: 134 T 134