Pairwise Alignments

Query, 153 a.a., prepilin-type cleavage/methylation domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 144 a.a., pilin polypeptide PilA-like from Synechococcus elongatus PCC 7942

 Score = 48.5 bits (114), Expect = 4e-11
 Identities = 37/127 (29%), Positives = 62/127 (48%), Gaps = 27/127 (21%)

Query: 2   KAYKNKQQKGFTLIELMIVVAVIGVLAAIAIPQY-----QNYVK--KSAIGVGLANITAL 54
           K  + +++KGFTL+EL++V+ ++G+LAA+A+P       + Y    KSA+G  L  ++A 
Sbjct: 17  KDEQGEEEKGFTLVELLVVIIIVGILAAVALPNLLAQTDKAYASEGKSAVGAALRTLSA- 75

Query: 55  KTNIEDYI-----------ATEGSFPATTAG----TAAGFTRLGTVEDMG----DGKIVI 95
            T   +Y+           ++ G+F  T       TAAG  +   +   G    DGK  +
Sbjct: 76  ATLDPNYVTNASCTQLGIGSSAGNFDLTCGNASQVTAAGSGKAANINVTGTIGTDGKFTV 135

Query: 96  APTASGA 102
             T   A
Sbjct: 136 IATKGSA 142