Pairwise Alignments

Query, 153 a.a., prepilin-type cleavage/methylation domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 138 a.a., pilin, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 66.2 bits (160), Expect = 2e-16
 Identities = 49/151 (32%), Positives = 69/151 (45%), Gaps = 16/151 (10%)

Query: 1   MKAYK-NKQQKGFTLIELMIVVAVIGVLAAIAIPQYQNYVKKSAIGVGLANITALKTNIE 59
           MK+ K NKQ +GFTLIELMIVVA+IG+LAA+A+P Y+ YV  S  G  +  +    T  +
Sbjct: 1   MKSIKMNKQAQGFTLIELMIVVAIIGILAAVALPAYREYVATSHGGASMKGLAGYVTKAQ 60

Query: 60  DYIATEGSFPATTAGTAAGFTRLGTVEDMGDGKIVIAPTASGALGGTIKYTFDAGVVSSS 119
             I            T  G   +GT E   D KI   P  + A    + Y      V+++
Sbjct: 61  ACIQ-----------TGVGCATIGT-EITADPKIAATPDVAEATATALTYDDGTCTVTAT 108

Query: 120 KIQLARDANGLWTCSTTVTSEIAPKGCTAGA 150
              +       +   T  T++     C  GA
Sbjct: 109 ---IGATGGVSYAADTKETTKATKAQCEEGA 136