Pairwise Alignments

Query, 181 a.a., 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD from Vibrio cholerae E7946 ATCC 55056

Subject, 262 a.a., Negative regulator of beta-lactamase expression from Pseudomonas stutzeri RCH2

 Score = 69.7 bits (169), Expect = 4e-17
 Identities = 53/173 (30%), Positives = 78/173 (45%), Gaps = 33/173 (19%)

Query: 13  KVPSPHCDVRHDSEDISLLVVHNISLPPGQFGGPYIEQFFLGELDANQHSFFKVIAKMRV 72
           ++ + H  + HDS     +V+H  S                    A+     ++++   V
Sbjct: 21  RIDTSHSSIGHDSRS-QFIVLHYTS--------------------ADLPRSLELLSGRDV 59

Query: 73  SAHCVIRRD-GEVVQFVPFHLRAWHAGVSSFAGRAKCNDYSIGIELEGSDFV-------- 123
           S+H +I      + + V  + RAWHAG S +  R   N  SIGIEL    +V        
Sbjct: 60  SSHYLIGESPATIYRLVDENRRAWHAGESEWNDRTWLNATSIGIELVNRGYVESADGRRL 119

Query: 124 --PYTDAQYQALTELTQALMVRYPHITLPRITGHQYIAPLRKTDPGLVFDWRR 174
             PY+DAQ  AL  L + +M R+  +    I GH  IAP RK DPG +F W+R
Sbjct: 120 WHPYSDAQIDALVVLLKDIMARH-ELKPGAIIGHSDIAPQRKVDPGPLFPWKR 171