Pairwise Alignments

Query, 181 a.a., 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD from Vibrio cholerae E7946 ATCC 55056

Subject, 283 a.a., N-acetylmuramoyl-L-alanine amidase, family 2 from Pseudomonas syringae pv. syringae B728a

 Score = 76.3 bits (186), Expect = 5e-19
 Identities = 50/129 (38%), Positives = 69/129 (53%), Gaps = 13/129 (10%)

Query: 60  QHSFFKVIAKMRVSAHCVIRRDGE--VVQFVPFHLRAWHAGVSSFAGRAKCNDYSIGIEL 117
           +HS  +++    VSAH +I  D +  + + V  + RAWHAG S + GR   N  SIGIE+
Sbjct: 72  EHSL-QLLTHGEVSAHYLIGDDSKATIYKLVDENARAWHAGESEWEGRTWLNSSSIGIEI 130

Query: 118 EGSDF---------VPYTDAQYQALTELTQALMVRYPHITLPRITGHQYIAPLRKTDPGL 168
               F          PYT+AQ Q++  L + ++ R   I    I GH  IAPLRK DPG 
Sbjct: 131 VNPGFKETPTGRLWYPYTEAQTQSIIVLLKDIVKRN-RIDPKHIIGHSDIAPLRKQDPGP 189

Query: 169 VFDWRRFRA 177
           +F W+R  A
Sbjct: 190 LFPWKRLAA 198