Pairwise Alignments

Query, 181 a.a., 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD from Vibrio cholerae E7946 ATCC 55056

Subject, 263 a.a., amidase (AMPD protein) from Sinorhizobium meliloti 1021

 Score = 70.5 bits (171), Expect = 2e-17
 Identities = 43/114 (37%), Positives = 58/114 (50%), Gaps = 6/114 (5%)

Query: 71  RVSAHCVIRRDGEVVQFVPFHLRAWHAGVSSFAGRAKCNDYSIGIELEGS----DFVPYT 126
           +VS H  +  +G + Q VP   RAWHAG   + G    N  SIGIE+  +        + 
Sbjct: 54  QVSCHYFVDEEGRIAQLVPEERRAWHAGKGVWKGETDINSCSIGIEIANAGHPGGLPDFP 113

Query: 127 DAQYQALTELTQALMVRYPHITLPRITGHQYIAPLRKTDPGLVFDWR-RFRAGL 179
           +AQ +A+ EL      R+  IT  R+  H  IAP+RK DPG  F W   FR G+
Sbjct: 114 EAQIEAVAELCLDCGERW-QITPERVLAHSDIAPIRKVDPGENFPWDVLFRRGV 166