Pairwise Alignments

Query, 181 a.a., 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD from Vibrio cholerae E7946 ATCC 55056

Subject, 237 a.a., putative N-acetylmuramoyl-L-alanine amidase AmiD from Phaeobacter inhibens DSM 17395

 Score = 75.5 bits (184), Expect = 7e-19
 Identities = 46/109 (42%), Positives = 60/109 (55%), Gaps = 2/109 (1%)

Query: 72  VSAHCVIRRDGEVVQFVPFHLRAWHAGVSSFAGRAKCNDYSIGIELEGSDFVPYTDAQYQ 131
           VSAH +I  DG + Q V    RAWHAG   + G+   N  SIGIEL+     P++  Q  
Sbjct: 58  VSAHYLIGADGTLWQMVREADRAWHAGAGEWCGQEDINSRSIGIELDNRGDHPFSAPQMT 117

Query: 132 ALTELTQALMVRYPHITLPRITGHQYIAPLRKTDPGLVFDWRRF-RAGL 179
            L  L  A++ R+  I+   + GH  +AP RK+DPG  FDW R  R GL
Sbjct: 118 RLETLLSAILQRWA-ISPTGVIGHSCMAPGRKSDPGPRFDWARLARQGL 165