Pairwise Alignments

Query, 181 a.a., 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD from Vibrio cholerae E7946 ATCC 55056

Subject, 198 a.a., N-acetyl-anhydromuranmyl-L-alanine amidase from Burkholderia phytofirmans PsJN

 Score =  179 bits (454), Expect = 3e-50
 Identities = 90/176 (51%), Positives = 119/176 (67%), Gaps = 4/176 (2%)

Query: 2   IDSQGWYRLARKVPSPHCDVRHDSEDISLLVVHNISLPPGQFGGPYIEQFFLGELDANQH 61
           +D+ GW   ARK+PSP+ + R ++   +L+VVHNISLPP +FGG  I + FL  LD + H
Sbjct: 7   VDAYGWVAAARKLPSPNFEARPEAAVPTLIVVHNISLPPNEFGGTAIAELFLNTLDCDAH 66

Query: 62  SFFKV-IAKMRVSAHCVIRRDGEVVQFVPFHLRAWHAGVSSFAGRAKCNDYSIGIELEGS 120
            ++   +  +RVSAH VI RDG + QFV  + RAWHAG S+F GR +CND+SIGIELEGS
Sbjct: 67  PYYDSHLRGVRVSAHFVIHRDGALEQFVSCNERAWHAGPSNFFGRERCNDFSIGIELEGS 126

Query: 121 DFVPYTDAQYQALTELTQALMVRYPHITLPRITGHQYIAPLRKTDPGLVFDWRRFR 176
           D  P+  AQY+ L+ L  AL  RYP   +  + GH  IAP RKTDPG  F+W+R +
Sbjct: 127 DTAPFEAAQYRTLSALVSALKARYP---VEALAGHSDIAPGRKTDPGPHFEWQRLQ 179