Pairwise Alignments

Query, 302 a.a., site-specific tyrosine recombinase XerD from Vibrio cholerae E7946 ATCC 55056

Subject, 304 a.a., tyrosine recombinase XerD from Dechlorosoma suillum PS

 Score =  277 bits (708), Expect = 2e-79
 Identities = 146/302 (48%), Positives = 204/302 (67%), Gaps = 17/302 (5%)

Query: 11  LVEQFLDTMWFERGLAENTVASYRNDLSKLLEWMAQNQYRLDFISFAGLQEYQSWLSEQ- 69
           L+E+F++T+W + GLA+NT+++YR+DL +  +W+         +S AG  E  ++L    
Sbjct: 8   LIEEFINTVWLQNGLAQNTLSAYRSDLVQFAKWLKVP------LSAAGEVEISNYLVHLY 61

Query: 70  ----NYKPTSKARMLSAIRRLFQYLHREKVRADDPSALLVSPKLPTRLPKDLSEAQVEAL 125
                 KP+S+ R++S +RR + +L        +P   +  P L  RLPK L+ AQVEAL
Sbjct: 62  SQPIRPKPSSQRRLISVLRRFYGWLFEGHRIQKNPMLTMELPSLGVRLPKVLAMAQVEAL 121

Query: 126 LSAPDPQSPLELRDKAMLELLYATGLRVTELVSLTMENMSLRQGVVRVMGKGGKERLVPM 185
           L APD  + L LRD+A+LE+LYATG RV+ELV LT+  ++L  GVVR +GKG KERLVP+
Sbjct: 122 LEAPDTSTALGLRDRALLEVLYATGFRVSELVGLTLTQLNLDMGVVRTIGKGNKERLVPL 181

Query: 186 GENAIEWIETFLQQGRSLLLGEQTSDIVF------PSSRGQQMTRQTFWHRIKHYAVIAG 239
           GE + +W+  +L + R +LL  ++SD +F        +   +MTRQ  W  IK Y  + G
Sbjct: 182 GEISSDWLVRYLAESRPVLLKGRSSDGLFITGHQKKDNNDARMTRQMAWLLIKKYGELVG 241

Query: 240 IDVEKLSPHVLRHAFATHLLNYGADLRVVQMLLGHSDLSTTQIYTHVATERLKQLHNEHH 299
           I  +++SPHVLRHAFATHLLN GADLR+VQ+LLGH+D+STTQIYTHVA ERLK+LH +HH
Sbjct: 242 IPRDRISPHVLRHAFATHLLNCGADLRIVQLLLGHADISTTQIYTHVARERLKELHAKHH 301

Query: 300 PR 301
           PR
Sbjct: 302 PR 303