Pairwise Alignments

Query, 302 a.a., site-specific tyrosine recombinase XerD from Vibrio cholerae E7946 ATCC 55056

Subject, 307 a.a., tyrosine recombinase XerD from Dechlorosoma suillum PS

 Score =  304 bits (778), Expect = 2e-87
 Identities = 156/295 (52%), Positives = 214/295 (72%), Gaps = 4/295 (1%)

Query: 9   QGLVEQFLDTMWFERGLAENTVASYRNDLSKLLEWMAQNQYRLDFISFAGLQEYQSWLSE 68
           Q  ++ F D +W E GL+ N++A+YR+DL +   W+ Q Q R   ++ AG  +  ++L++
Sbjct: 14  QSEIDAFCDALWLEDGLSPNSLAAYRSDLQRYALWL-QQQGRPP-LAQAGAADLAAFLAD 71

Query: 69  --QNYKPTSKARMLSAIRRLFQYLHREKVRADDPSALLVSPKLPTRLPKDLSEAQVEALL 126
                K +S+AR LS++RR ++ L  +   + DP+     P   +RLPK +SEAQVEALL
Sbjct: 72  VAARMKSSSQARYLSSLRRFYRRLLAQNRISADPTLQTAMPVKASRLPKVMSEAQVEALL 131

Query: 127 SAPDPQSPLELRDKAMLELLYATGLRVTELVSLTMENMSLRQGVVRVMGKGGKERLVPMG 186
           +AP+ ++PL  RD+AMLE LYATGLRV+ELV+L +  +S   GV RV GKG KERLVP+G
Sbjct: 132 AAPEIETPLGQRDRAMLETLYATGLRVSELVNLKLHEVSFDMGVARVFGKGSKERLVPLG 191

Query: 187 ENAIEWIETFLQQGRSLLLGEQTSDIVFPSSRGQQMTRQTFWHRIKHYAVIAGIDVEKLS 246
           E A++W++++L  GR+ LL  + SD +F ++RG  MTRQ FW  +K YA++AG+D  +LS
Sbjct: 192 EVALDWLKSYLNDGRNALLDNRLSDFLFVTARGTAMTRQMFWTLVKKYALVAGMDPARLS 251

Query: 247 PHVLRHAFATHLLNYGADLRVVQMLLGHSDLSTTQIYTHVATERLKQLHNEHHPR 301
           PHVLRHAFATHLLN+GADLRVVQ+LLGH+D+STTQIYTHVA ERLK LH  HHPR
Sbjct: 252 PHVLRHAFATHLLNHGADLRVVQLLLGHADISTTQIYTHVARERLKDLHAVHHPR 306