Pairwise Alignments

Query, 302 a.a., site-specific tyrosine recombinase XerD from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., tyrosine recombinase XerC from Dechlorosoma suillum PS

 Score =  167 bits (422), Expect = 4e-46
 Identities = 104/296 (35%), Positives = 166/296 (56%), Gaps = 7/296 (2%)

Query: 11  LVEQFLDTMWFERGLAENTVASYRNDLSKLLEWMAQ--NQYRLDFISFAGLQEYQSWLSE 68
           L   FLD +  +R  + +TV++YR DL KLL   A+      L  +    ++ +   L  
Sbjct: 6   LAGAFLDELATQRRQSPHTVSNYRRDLGKLLALAAELPGSPGLGELQSHHIRRFVGLLHG 65

Query: 69  QNYKPTSKARMLSAIRRLFQYLHREKVRADDPSALLVSPKLPTRLPKDLSEAQVEALLSA 128
           +     S AR LSA R  +++L R      +P   +  PK P  LP+ LS  +   LL  
Sbjct: 66  RGLAGRSLARSLSAWRVFYRWLGRHGHAGHNPCEGVRPPKSPKALPRTLSPDETARLLET 125

Query: 129 P-DPQSPLELRDKAMLELLYATGLRVTELVSLTMENMS-LRQGVVRVMGKGGKERLVPMG 186
             DP  P ELRD+AM EL Y++GLR+ EL  L ++ ++ +  G VRV GK  KER+VP+G
Sbjct: 126 SIDPDDPQELRDQAMFELFYSSGLRLAELAELDVDALTDIGGGEVRVHGKRDKERVVPVG 185

Query: 187 ENAIEWIETFLQQGRSLLLGEQTSDIVFPSSRGQQMTRQTFWHRIKHYAVIAGIDVEKLS 246
             A + +  ++ +   L   E+ +  +F  +RG+++       R+   A++AG+    + 
Sbjct: 186 SKARQALAAWMARRPELARPEEKA--LFVGARGRRIAHGIIQQRLSRRALLAGLP-SHVH 242

Query: 247 PHVLRHAFATHLLNYGADLRVVQMLLGHSDLSTTQIYTHVATERLKQLHNEHHPRA 302
           PH+LRH+FA+H+L    DLR VQ +LGH+ +++TQ+YTH+  + L Q+++  HPRA
Sbjct: 243 PHMLRHSFASHVLQSSGDLRAVQEMLGHASIASTQVYTHLDFQHLAQVYDTAHPRA 298