Pairwise Alignments

Query, 302 a.a., site-specific tyrosine recombinase XerD from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., Tyrosine recombinase XerC from Enterobacter sp. TBS_079

 Score =  174 bits (440), Expect = 3e-48
 Identities = 109/295 (36%), Positives = 168/295 (56%), Gaps = 12/295 (4%)

Query: 12  VEQFLDTMWFERGLAENTVASYRNDLSKLL----EWMAQNQYRLDFISFAGLQEYQSWLS 67
           V +FL  +  ER L+  T+ +Y+  L  ++    E   ++  + D  +  G+        
Sbjct: 10  VARFLRYLGVERQLSPITLLNYQRQLDAIMQIADEIGLKSWQQCDAATVRGVVVRSR--- 66

Query: 68  EQNYKPTSKARMLSAIRRLFQYLHREKVRADDPSALLVSPKLPTRLPKDLSEAQVEALLS 127
            +   P S A  LSA+R  F +L  +     +P+  + +PK P  LPK++    V  LL 
Sbjct: 67  RKGLGPASLALRLSALRSFFDWLVSQGSLKANPAKGIATPKAPRHLPKNIDVDDVNRLLD 126

Query: 128 APDPQSPLELRDKAMLELLYATGLRVTELVSLTMENMSLRQGVVRVMGKGGKERLVPMGE 187
             D   PL +RD+AMLE++Y  GLR++ELV+L ++++ L  G V VMGKG KER +P+G 
Sbjct: 127 I-DLNDPLAVRDRAMLEVMYGAGLRLSELVNLDIKHLDLDTGEVWVMGKGSKERRLPIGR 185

Query: 188 NAIEWIETFLQQGRSLLLGEQTSDIVFPSSRGQQMTRQTFWHRIKHYAVIAGIDVEKLSP 247
           NA+ WIE +L   R L   E+  D +F S  G++++ +    R   + +  G++   + P
Sbjct: 186 NAVAWIEHWLDL-RGLFGAEE--DALFLSKLGKRISARNVQKRFAEWGIKQGLN-SHVHP 241

Query: 248 HVLRHAFATHLLNYGADLRVVQMLLGHSDLSTTQIYTHVATERLKQLHNEHHPRA 302
           H LRH+FATH+L    DLR VQ LLGH++LSTTQIYTH+  + L  +++  HPRA
Sbjct: 242 HKLRHSFATHMLESSGDLRGVQELLGHANLSTTQIYTHLDFQHLASVYDAAHPRA 296