Pairwise Alignments

Query, 302 a.a., site-specific tyrosine recombinase XerD from Vibrio cholerae E7946 ATCC 55056

Subject, 294 a.a., site-specific recombinase, phage integrase family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  201 bits (510), Expect = 2e-56
 Identities = 113/290 (38%), Positives = 169/290 (58%), Gaps = 3/290 (1%)

Query: 12  VEQFLDTMWFERGLAENTVASYRNDLSKLLEWMAQNQYRLDFISFAGLQEYQSWLSEQNY 71
           ++++L+ +  ERGLAENT+A+Y  DL +L  ++ +    L  +    L  +   L  +  
Sbjct: 1   MDRWLEHLLVERGLAENTLAAYSADLIELQVFLEERGCLLAEVDEQTLFMHVVDLRRRGM 60

Query: 72  KPTSKARMLSAIRRLFQYLHREKVRADDPSALLVSPKLPTRLPKDLSEAQVEALLSAPDP 131
              + AR L+ +R  F +   E     DP+  L +PKL   LP  L+  ++  +L+ PD 
Sbjct: 61  AGRTLARHLATLRGFFAFAVGEGELEADPALFLENPKLARNLPDVLTRDEMATILARPDL 120

Query: 132 QSPLELRDKAMLELLYATGLRVTELVSLTMENMSLRQGVVRVMGKGGKERLVPMGENAIE 191
              L  RD+ MLEL+YA GLRV+EL +L   +   + GVVRV GKG KER+VP+   +  
Sbjct: 121 SDRLGFRDRTMLELMYAAGLRVSELCALRPLDFDAQAGVVRVFGKGAKERIVPVHHVSCA 180

Query: 192 WIETFLQQGRSLLLGEQTSDIVFPSSRGQQMTRQTFWHRIKHYAVIAGIDVEKLSPHVLR 251
            +  +L+  R           +F +  G+ ++RQ  W  +K +   AGI  + +SPH  R
Sbjct: 181 LVTAYLRDWRPAF--SPVEPAMFLNRSGKGLSRQAVWKVVKRHVAEAGIHKD-ISPHTFR 237

Query: 252 HAFATHLLNYGADLRVVQMLLGHSDLSTTQIYTHVATERLKQLHNEHHPR 301
           H+FATHLL  GADLR VQ+LLGH+D+S T+IYTHV  +RL+++HN HHPR
Sbjct: 238 HSFATHLLEGGADLRSVQLLLGHADISATEIYTHVQADRLRRIHNAHHPR 287