Pairwise Alignments

Query, 256 a.a., pyruvate dehydrogenase complex transcriptional repressor PdhR from Vibrio cholerae E7946 ATCC 55056

Subject, 258 a.a., regulatory protein GntR (NCBI) from Rhodospirillum rubrum S1H

 Score =  139 bits (350), Expect = 6e-38
 Identities = 88/245 (35%), Positives = 133/245 (54%), Gaps = 4/245 (1%)

Query: 6   IRQPKLSDVIEQELERLIVEGTLSPGQQLPPERELAKQFEVSRPSIREAIQRLEAKRLL- 64
           IR  +L++ I   LERLI EG L PG++L PERELA +  VSRPS+R+ +  +E + L+ 
Sbjct: 7   IRATRLAETIADHLERLIAEGALRPGERLLPERELALKLNVSRPSLRDGLAAMERRGLIV 66

Query: 65  TRRQGGGTFVSDRIWQSFSDPLLNLLSSHSETQLDLLEARHALEGICAYFAALRGTEEDF 124
           T RQG          +  ++PL  L+ ++++   D LE R  +EG  A  AA R T+ D 
Sbjct: 67  TDRQGSRVA---EFLRPLTEPLELLIQNNTQATFDYLEFRFVVEGAAAEMAAKRATDLDR 123

Query: 125 ARIQHCVTRIAEAQALNNVDEEAERVMAFLIAITEAAHNVVLLHIVRSLSPLLEQNIRQN 184
           A I+  + R+A     ++   EAE       A  EA +NV++LHI+R  S LL +++  N
Sbjct: 124 AAIRAILDRMAAVHGDDDSAAEAEADADLHSATYEATYNVMILHIMRGFSQLLRRDVFYN 183

Query: 185 FKLLHRRPEAVEKVSKHRANIVDAIVSGQPEKAREMSHSHLAYIEETLLDLTREQTRRER 244
            + L+ RP   + +  H   I +AI++G    AR  +  H+    ETL ++     R   
Sbjct: 184 RERLYARPGVRDLLLGHHQAIGEAIIAGDGPAARRAAEEHITVTRETLEEIRDADARLAM 243

Query: 245 SLRRI 249
           SLRRI
Sbjct: 244 SLRRI 248