Pairwise Alignments

Query, 256 a.a., pyruvate dehydrogenase complex transcriptional repressor PdhR from Vibrio cholerae E7946 ATCC 55056

Subject, 242 a.a., regulatory protein GntR, HTH (RefSeq) from Shewanella loihica PV-4

 Score = 91.7 bits (226), Expect = 1e-23
 Identities = 69/225 (30%), Positives = 113/225 (50%), Gaps = 10/225 (4%)

Query: 3   YQRIRQPKLSDVIEQELERLIVEGTLSPGQQLPPERELAKQFEVSRPSIREAIQRLEAKR 62
           +Q I+Q K S+ +  +L++ I +G  S G +LP EREL + F+VSR  +REAI+ LEAK 
Sbjct: 8   FQPIKQVKASEEVSNQLKQAIFQGKFSVGDKLPSERELIESFQVSRTVVREAIKSLEAKD 67

Query: 63  LLTRRQG--GGTFVSDRIWQSFSDPLLNLLSSHSETQLDLLEARHALEGICAYFAALRGT 120
           L+  +QG  GG FV    ++  S+   +L      +  ++ +AR A+E I A  AA   T
Sbjct: 68  LVEIKQGATGGAFVKALTFERLSNDCKDLFFLGQMSFNEICQARLAIEPIVAGLAAKYCT 127

Query: 121 EEDFARIQHCVTRIAEAQALNNVDEEAERVMAFLIAITEAAHNVVLLHIVRSLSPLLEQN 180
           +E   +++      +++ A         RV   L    +   N  L+ I +SL  L+   
Sbjct: 128 QEQATQLREANAHESDSLAYPETVFLRSRVHYLL---ADMCQNRFLMAIDKSLIQLVASI 184

Query: 181 IRQNFKLLHRRPEAVEKVSKHRANIVDAIVSGQPEKAREMSHSHL 225
           ++Q         + +     H  +IVDA+++G  + A E   SHL
Sbjct: 185 VQQ----FQPDTDKIHPAGLHN-SIVDAVIAGDEKAAEEAMRSHL 224