Pairwise Alignments

Query, 256 a.a., pyruvate dehydrogenase complex transcriptional repressor PdhR from Vibrio cholerae E7946 ATCC 55056

Subject, 238 a.a., GntR domain protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  104 bits (259), Expect = 2e-27
 Identities = 74/238 (31%), Positives = 122/238 (51%), Gaps = 8/238 (3%)

Query: 2   AYQRIRQPKLSDVIEQELERLIVEGTLSPGQQLPPERELAKQFEVSRPSIREAIQRLEAK 61
           A++  R+ +L + I  ++  LI +G L  G +LPPER LA+ F VSR  +REAI+ LE +
Sbjct: 8   AFKPARRIRLHEEIVGQIRDLIEKGELKSGDKLPPERRLAELFGVSRHCVREAIRSLEQQ 67

Query: 62  RLLTRRQGGGTFVSDRIWQSFSDPLLNLLSSHSETQLDLLEARHALEGICAYFAALRGTE 121
           R++T R G GT+V D   ++  +PL  ++        ++LE R  LE   A  AA   ++
Sbjct: 68  RIVTSRLGDGTYVLDDTEETLIEPLAAIIEQRRAKLREVLEFRRLLEPQIAALAAAHVSD 127

Query: 122 EDFARIQHCV-TRIAEAQALNNVDEEAERVMAFLIAITEAAHNVVLLHIVRSLSPLLEQN 180
            D A ++  +  +IAE     N   +A+  + F + I  A  N V+  ++  L  +L  +
Sbjct: 128 GDLAALRRALDAQIAEIGG-GNTGSDAD--VEFHMIIARATRNTVVQEVLTRLHDILTDS 184

Query: 181 IRQNFKLLHRRPEAVEKVSKHRANIVDAIVSGQPEKAREMSHSHLAYIEETLLDLTRE 238
                +   RR  AV       ANI+ A+ +  P+ A    H H+ ++EE  L+ + E
Sbjct: 185 RDFTLQTEDRRQWAVAT----HANILAAMEARDPQAAFRAMHEHILHVEEIALEWSGE 238