Pairwise Alignments

Query, 886 a.a., pyruvate dehydrogenase (acetyl-transferring), homodimeric type from Vibrio cholerae E7946 ATCC 55056

Subject, 283 a.a., transketolase from Methanococcus maripaludis JJ

 Score = 57.8 bits (138), Expect = 9e-13
 Identities = 66/253 (26%), Positives = 106/253 (41%), Gaps = 30/253 (11%)

Query: 103 GGHMASFQSSAAFYETCFNHFFRAPNEKDGGDLVYYQGHISPGIYARAFVEGRLTEEQLD 162
           GG +++    ++ Y    N+  + P +      +  +GH  P +Y      G   EE+L 
Sbjct: 44  GGSLSAIDIVSSLYYNIMNYDPKDPKQDSRDRFILSKGHACPALYVTLADLGYFKEEELW 103

Query: 163 NFRQEVDGKGLPSYPHPKLMPEFWQFPTVSMGLGPISAIYQA---RFLKYLNGRGLKDTT 219
           N RQ     G     HP +     +  T S+G G  S++  A   +  KY N        
Sbjct: 104 NLRQ----LGALLQGHPTIEIPGIEVNTGSLGQGFSSSVGVAIGCKLNKYENN------- 152

Query: 220 AQRVYAFLGDGEMDEPESRGAISFAAREKLDNLCFLINCNLQRLDGPVMGNGKIIQELEG 279
              V+  LGDGE  E +   A   AA  KLDNL   ++ N  ++DG    +   + +L+ 
Sbjct: 153 ---VFVLLGDGECQEGQVWEAAMAAAHYKLDNLIGFVDRNKLQIDG-CTEDVMCLMDLKA 208

Query: 280 LFRGAGWNVVKVIWGNGWDKL-----LAKD-TTGKLLQLMNETIDGDYQTFKAKDGAYVR 333
            F   G++V + I G+ ++++     LAK    GK   ++  TI G   +F   +     
Sbjct: 209 KFSAFGFDVFE-IDGHNFEEIVKTAELAKTMKNGKPKMIIANTIKGKGVSFMENNVG--- 264

Query: 334 EHFFGKYPETAAL 346
             F GK P    L
Sbjct: 265 --FHGKAPNKEEL 275



 Score = 25.4 bits (54), Expect = 0.005
 Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 1/35 (2%)

Query: 362 GHESSKLYAAFKNAQDTK-GRPTVILAKTVKGYGM 395
           GH   ++    + A+  K G+P +I+A T+KG G+
Sbjct: 222 GHNFEEIVKTAELAKTMKNGKPKMIIANTIKGKGV 256