Pairwise Alignments

Query, 635 a.a., pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 535 a.a., alpha keto acid dehydrogenase complex, E2 component (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  264 bits (674), Expect = 9e-75
 Identities = 177/537 (32%), Positives = 280/537 (52%), Gaps = 16/537 (2%)

Query: 109 LKEVQVPDIGGD--EVEVTEIMVKVGDVVAEEQSLITVEGDKASMEVPAPFAGTVKEIKI 166
           +K+  +PDIG    E E+ E +VK GD + E+Q +  V  DKA +++PAPFAG V ++  
Sbjct: 2   IKDFILPDIGEGVVECELVEWLVKEGDTIVEDQPIADVMTDKALVQIPAPFAGVVTKLYY 61

Query: 167 AAGDKVSTGSLIMVFEVAGAAPLA--AP--VQAAAP-AAAAAPAVAALKEVQVPDIGGD- 220
           A GD     + +   ++    P +  AP  V+ +AP  AA + A +++++  +PDIG   
Sbjct: 62  AKGDIAKVHAPLYAVQIEAEEPSSQVAPQTVEHSAPNQAAISAASSSIEQFLLPDIGEGI 121

Query: 221 -EVTVTEIMVNVGDSISEEQSLITVEGDKASMEVPAPFAGTLKEIKVATGDKVKTGSLIM 279
            E  + E +V  GD + E+Q +  V  DKA +++PA  AG + ++    G   K  + + 
Sbjct: 122 VECELVEWLVQEGDIVVEDQPIADVMTDKALVQIPAIKAGKIVKLHYRKGQLAKVHAPLY 181

Query: 280 VFEVAGAAPVAAPVQAAAAPAAAPAQAATPAAAAPATSGEFQENHEYSHASPVVRRLARE 339
             EV G   V   V A      A A  AT AA A A+  +       + ASP VRR+AR 
Sbjct: 182 AIEVEGG--VIPAVSAHETTNVAVANTATSAACATASVSQEPARQGKALASPAVRRMARA 239

Query: 340 FGVNLAKVKGSGRKNRILKEDVQNYVKEALKRLESGAQAAASGKGDGAALGLLPWPKVDF 399
             ++L++V GSG+  R+ KED+  +  +          A AS +        +P      
Sbjct: 240 LDIDLSRVPGSGKHGRVYKEDISRFQAQGSATPVVAPVATASTQQSSVTQSAVPITVASA 299

Query: 400 SKFGDTEVQPLSRIKKISGANLHRNWVMIPHVTQWDNADITELEKFRQEQNAMEAKRDTG 459
           ++     V+P+  +K +    +  +   IPH T  +  D+T+L   R+   A  +  +  
Sbjct: 300 ARADI--VEPIRGVKAVMAKLMVESVSTIPHFTYCEEFDLTDLVALRESMKAKYSSDE-- 355

Query: 460 MKITPLVFIMKAAAKALEAFPAFNSSLSDDGESLILKKYVNIGIAVDTPNGLVVPVFKDV 519
           +K+T + F MKA + AL  FP  NS ++ D   +  K   NIG+AVD+  GL+VP  KDV
Sbjct: 356 VKLTMMPFFMKAMSLALTQFPVLNSQVNADCTEITYKARHNIGMAVDSKVGLLVPNVKDV 415

Query: 520 NKKGIYELSKELAEVSKKARGGKLTAADMQGGCFTISSLGGIGGTAFTPIVNAPEVAILG 579
             K I E++ E+  ++  AR G++  AD++ G  +IS++G +GGT  TPI+N PEVAI+ 
Sbjct: 416 QDKSILEVAAEITRLTNAARSGRVAPADLKEGTISISNIGALGGTVATPIINKPEVAIVA 475

Query: 580 VSKSEMKPVWNGK-EFAPRLQLPLSLSYDHRVIDGAEGARFITYLNECLSDIRRLVL 635
           + K +  P +N K E   R  + +S S DHRVIDG   ARF     + L   + ++L
Sbjct: 476 LGKLQTLPRFNAKGEVEARQIMQVSWSGDHRVIDGGTIARFCNLWKQYLEQPQDMLL 532



 Score = 97.8 bits (242), Expect = 1e-24
 Identities = 90/326 (27%), Positives = 148/326 (45%), Gaps = 30/326 (9%)

Query: 7   MAIEIYVPDIGAD--EVEVTEILVKVGDKVAEEQSLITVEGDKASMEVPASQAGIVKEIK 64
           M  +  +PDIG    E E+ E LVK GD + E+Q +  V  DKA +++PA  AG+V ++ 
Sbjct: 1   MIKDFILPDIGEGVVECELVEWLVKEGDTIVEDQPIADVMTDKALVQIPAPFAGVVTKLY 60

Query: 65  VVAGD--KVSTGSLIMVFEAEGAAAAAPAPAPQAAAPVAAAPAAA--ALKEVQVPDIGGD 120
              GD  KV      +  EAE  ++       + +AP  AA +AA  ++++  +PDIG  
Sbjct: 61  YAKGDIAKVHAPLYAVQIEAEEPSSQVAPQTVEHSAPNQAAISAASSSIEQFLLPDIGEG 120

Query: 121 --EVEVTEIMVKVGDVVAEEQSLITVEGDKASMEVPAPFAGTVKEIKIAAGDKVSTGSLI 178
             E E+ E +V+ GD+V E+Q +  V  DKA +++PA  AG + ++    G      + +
Sbjct: 121 IVECELVEWLVQEGDIVVEDQPIADVMTDKALVQIPAIKAGKIVKLHYRKGQLAKVHAPL 180

Query: 179 MVFEVAGAAPLAAPVQAAAPAAAAAPAVAALKEVQVPDIGGDEVTVTEIMVNVGDSISEE 238
              EV G    A         A A  A +A              +V++     G +++  
Sbjct: 181 YAIEVEGGVIPAVSAHETTNVAVANTATSAACAT---------ASVSQEPARQGKALASP 231

Query: 239 QSLITVEGDKASMEVP-APFAGTLKEIKVATGDKVKTGSLIMVFEVAGAA-PVAAPVQAA 296
                V     ++++  +   G+ K  +V   D       I  F+  G+A PV APV  A
Sbjct: 232 ----AVRRMARALDIDLSRVPGSGKHGRVYKED-------ISRFQAQGSATPVVAPVATA 280

Query: 297 AAPAAAPAQAATPAAAAPATSGEFQE 322
           +   ++  Q+A P   A A   +  E
Sbjct: 281 STQQSSVTQSAVPITVASAARADIVE 306