Pairwise Alignments

Query, 316 a.a., ribosomal RNA small subunit methyltransferase H from Vibrio cholerae E7946 ATCC 55056

Subject, 315 a.a., S-adenosyl-methyltransferase MraW from Pseudomonas stutzeri RCH2

 Score =  308 bits (790), Expect = 8e-89
 Identities = 161/318 (50%), Positives = 227/318 (71%), Gaps = 12/318 (3%)

Query: 3   ASFQHISVLLNESIEGLAIKPDGIYIDGTFGRGGHSRTILAQLGPEGRLYSIDRDPQAIA 62
           +S +HI+VLL+E++  L+++PDG Y+DGTFGRGGHSR +L QLGP+G+L   D+DP AIA
Sbjct: 5   SSLRHITVLLDEAVAALSVRPDGRYLDGTFGRGGHSRLLLQQLGPDGQLLGFDKDPLAIA 64

Query: 63  EAQKI--DDPRFTIVHGPFSGIAEYAQRYDLVGKVDGVLFDLGVSSPQLDDAERGFSFMK 120
             Q +  +D RF +V   F+ + E   +    G V GVL DLGVSSPQLDDAERGFSF+ 
Sbjct: 65  TGQALAAEDGRFVVVQRSFAELGEEVSQRGWAGTVSGVLLDLGVSSPQLDDAERGFSFLN 124

Query: 121 DGPLDMRMDPTSGMPVSAWLAQADLDDITWVIREFGEDKHARRIAKAIVEYRENELNEPL 180
           DGPLDMRMDP+ G+  + W+AQAD ++I  V +E+GE++ A+R+A+A+V+ R      P 
Sbjct: 125 DGPLDMRMDPSRGLSAAEWIAQADEEEIARVFKEYGEERFAKRMARAVVQRR---AEAPF 181

Query: 181 TRTSQLAKLISDAAPKSFKEKKHPATRAFQAFRIYINSELEEIDTALRGASDILAPQGRL 240
            RT+ LAK++++A P ++++ K+PATRAFQ  RIYIN+EL +++  L  A + L   GRL
Sbjct: 182 ERTADLAKVLTEANP-AWEKGKNPATRAFQGLRIYINNELGDLERGLDAALEALEVGGRL 240

Query: 241 SVISFHSLEDRMVKRFMRKESQG--PQVPHGIPLTQDQIRALGSAKMKTVGKALKPSDQE 298
            VISFHSLEDR+VK+FMR+ ++G   ++P  +P+    I      ++K +GK    SD E
Sbjct: 241 VVISFHSLEDRIVKQFMRRHAKGEADKLPRDLPI----IPKAFEPRLKLLGKPQYASDAE 296

Query: 299 VELNPRSRSSVLRVAEKL 316
           V+ NPRSRS+V+RVAEKL
Sbjct: 297 VKANPRSRSAVMRVAEKL 314