Pairwise Alignments

Query, 316 a.a., ribosomal RNA small subunit methyltransferase H from Vibrio cholerae E7946 ATCC 55056

Subject, 313 a.a., S-adenosyl-methyltransferase MraW (RefSeq) from Shewanella amazonensis SB2B

 Score =  379 bits (974), Expect = e-110
 Identities = 193/317 (60%), Positives = 244/317 (76%), Gaps = 7/317 (2%)

Query: 1   MTASFQHISVLLNESIEGLAIKPDGIYIDGTFGRGGHSRTILAQLGPEGRLYSIDRDPQA 60
           M+  F H+SVLL E+++GL I+ DGIYIDGTFGRGGHSR +L++LG +GRL +IDRDPQA
Sbjct: 1   MSQDFAHLSVLLAETVDGLNIRADGIYIDGTFGRGGHSREVLSRLGVDGRLIAIDRDPQA 60

Query: 61  IAEAQKI-DDPRFTIVHGPFSGIAEYAQRYDLVGKVDGVLFDLGVSSPQLDDAERGFSFM 119
           I  A++  +D RF IVHG F  +A Y +   LVGK+DGVL DLGVSSPQLDDAERGFSF+
Sbjct: 61  IKAAEQFANDSRFQIVHGGFGQLANYVEELGLVGKIDGVLLDLGVSSPQLDDAERGFSFL 120

Query: 120 KDGPLDMRMDPTSGMPVSAWLAQADLDDITWVIREFGEDKHARRIAKAIVEYRENELNEP 179
           +DGPLDMRMD + G   + WLA+A+++D+ WV + +GE+++AR IA+ I   RE     P
Sbjct: 121 RDGPLDMRMDNSQGETAAQWLARAEIEDMAWVFKTYGEERNARHIARCIAADRE---KTP 177

Query: 180 LTRTSQLAKLISDAAPKSFKEKKHPATRAFQAFRIYINSELEEIDTALRGASDILAPQGR 239
            TRT QLA LI+  A KS +  KHPATR FQA RIYINSELE+ID AL GA  +LAP GR
Sbjct: 178 FTRTKQLADLIARVA-KSKERNKHPATRVFQAIRIYINSELEQIDQALEGALKVLAPHGR 236

Query: 240 LSVISFHSLEDRMVKRFMRKESQGPQVPHGIPLTQDQIRALGSAKMKTVGKALKPSDQEV 299
           LS+ISFHSLEDR+VKRF+R+ SQG ++PHG+P+T+ Q+    S  +  VGKA+KPSD E+
Sbjct: 237 LSIISFHSLEDRIVKRFIRRHSQGEELPHGLPVTEAQLNK--SRTLMPVGKAMKPSDVEI 294

Query: 300 ELNPRSRSSVLRVAEKL 316
           E N R+RSSVLRVAE+L
Sbjct: 295 EQNARARSSVLRVAERL 311