Pairwise Alignments

Query, 316 a.a., ribosomal RNA small subunit methyltransferase H from Vibrio cholerae E7946 ATCC 55056

Subject, 335 a.a., S-adenosyl-L-methionine-dependent methyltransferase MraW from Phaeobacter inhibens DSM 17395

 Score =  203 bits (517), Expect = 4e-57
 Identities = 138/320 (43%), Positives = 189/320 (59%), Gaps = 25/320 (7%)

Query: 2   TASFQHISVLLNESIEGLAIKPDGIYIDGTFGRGGHSRTILAQLGPEGRLYSIDRDPQAI 61
           T++  H+ VLL   ++ +A    G ++DGTFG GG+SR +L + G +  +  +DRDP A 
Sbjct: 7   TSTGPHVPVLLRPLLKAVA-PVSGRWLDGTFGAGGYSRGLL-EAGAD-HVIGVDRDPLAF 63

Query: 62  AEAQK-IDD--PRFTIVHGPFSGIAEYAQRYDLVGKVDGVLFDLGVSSPQLDDAERGFSF 118
             A+  I D   R T+  G FS + EYAQ       +DGV+ DLGVSS QLD AERGFSF
Sbjct: 64  EMAESWIGDYAGRLTLQQGVFSRMDEYAQ------DLDGVVLDLGVSSMQLDLAERGFSF 117

Query: 119 MKDGPLDMRM--DPTSGMPVSAWLAQADLDDITWVIREFGEDKHARRIAKAIVEYRENEL 176
           M+DGPLDMRM  D  S   + A L +A L DI ++   FGE++ +RRIA+AIV+ R    
Sbjct: 118 MRDGPLDMRMSQDGPSAADLVAELDEAALADILFL---FGEERASRRIARAIVKARTEA- 173

Query: 177 NEPLTRTSQLAKLISDAAPKSFKEKKHPATRAFQAFRIYINSELEEIDTALRGASDILAP 236
             P+T T QLA +I    P+S   + HPATR+FQ  RI +N+E EE+   L  A   L P
Sbjct: 174 --PITTTLQLAGIIEHCLPRSKPGQSHPATRSFQGLRIAVNAEYEELFEGLLAAERALKP 231

Query: 237 QGRLSVISFHSLEDRMVKRFMR-KESQGPQVPHGIPLTQDQIRALGSAKMKTVGKALKPS 295
            G L+V++FHS+EDRMVKRF + +  +  +     P  ++          K VG    P 
Sbjct: 232 GGLLAVVTFHSIEDRMVKRFFQHRAGKTGRANRYAPEVEETPSQFALVTRKAVG----PD 287

Query: 296 DQEVELNPRSRSSVLRVAEK 315
           D+E+  NPRSRS+ LRV  +
Sbjct: 288 DEELAENPRSRSARLRVGRR 307