Pairwise Alignments

Query, 316 a.a., ribosomal RNA small subunit methyltransferase H from Vibrio cholerae E7946 ATCC 55056

Subject, 327 a.a., S-adenosyl-L-methionine-dependent methyltransferase mraW from Marinobacter adhaerens HP15

 Score =  306 bits (784), Expect = 4e-88
 Identities = 169/317 (53%), Positives = 219/317 (69%), Gaps = 15/317 (4%)

Query: 3   ASFQHISVLLNESIEGLAIKPDGIYIDGTFGRGGHSRTILAQLGPEGRLYSIDRDPQAIA 62
           A++ H SVLL+ +++ L   PDG Y+DGTFGRGGHSR IL +LGP  RL  ID+DP+AI 
Sbjct: 11  AAYSHRSVLLDSAVDYLVNDPDGYYVDGTFGRGGHSRLILGRLGPSARLLGIDKDPEAIR 70

Query: 63  EAQKID--DPRFTIVHGPFS--GIAEYAQRYDLVGKVDGVLFDLGVSSPQLDDAERGFSF 118
            A++++  D RF   HG F+  G A   Q +  V   +GVL DLGVSSPQLDDA RGFSF
Sbjct: 71  AAKELEAQDNRFHSFHGSFAELGAAVVGQGWQTV---NGVLLDLGVSSPQLDDASRGFSF 127

Query: 119 MKDGPLDMRMDPTSGMPVSAWLAQADLDDITWVIREFGEDKHARRIAKAIVEYRENELNE 178
           M+DGPLDMRM+       + WLA AD  DI  VI  +GE+K +RRIA+ +VE R+     
Sbjct: 128 MRDGPLDMRMNTEQSPSAAEWLATADESDIANVIFRYGEEKFSRRIARLLVERRQEA--- 184

Query: 179 PLTRTSQLAKLISDAAPKSFKEKKHPATRAFQAFRIYINSELEEIDTALRGASDILAPQG 238
           P+  T QLA+L+S+A PK  K K HPATR FQA RI+IN ELE+++  L+ A D LAP G
Sbjct: 185 PVETTRQLAELVSEAVPKKEKHK-HPATRTFQAIRIFINRELEDLEVGLQSAVDHLAPGG 243

Query: 239 RLSVISFHSLEDRMVKRFMRKESQGPQVPHGIPLTQDQIRALGSAKMKTVGKALKPSDQE 298
           RL VISFHSLEDR+VKRFMR  ++GPQ+P G+P+T +Q     ++  + VGKA K   +E
Sbjct: 244 RLVVISFHSLEDRLVKRFMRDLARGPQLPKGVPVTAEQ----EASDFRLVGKASKAGAEE 299

Query: 299 VELNPRSRSSVLRVAEK 315
           V  N R+RS+V+RV E+
Sbjct: 300 VSDNVRARSAVMRVLER 316