Pairwise Alignments

Query, 316 a.a., ribosomal RNA small subunit methyltransferase H from Vibrio cholerae E7946 ATCC 55056

Subject, 323 a.a., S-adenosyl-methyltransferase MraW (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  193 bits (490), Expect = 5e-54
 Identities = 130/320 (40%), Positives = 178/320 (55%), Gaps = 22/320 (6%)

Query: 7   HISVLLNESIEGLAIKPDGIYIDGTFGRGGHSRTILAQLGPEGRLYSIDRDPQAIAEAQK 66
           HI VLL E +E LA +  G Y+DGT G  GH+  +L + G    L  +DRDP+A+  A  
Sbjct: 16  HIPVLLEEVLEYLAPRKGGRYLDGTLGLAGHASAVLERAGEGTELCGLDRDPEALRRATA 75

Query: 67  IDDPRFTIVHGPFSGIAEYAQRYDLVG--KVDGVLFDLGVSSPQLDDAERGFSFMKDGPL 124
              P     H      +E+ +  D +G   VDG L D+GVSS Q+D AERGFSF  DGPL
Sbjct: 76  RLAPFAGQTHLYHLRYSEFEEALDDLGWPTVDGALIDIGVSSMQIDLAERGFSFHADGPL 135

Query: 125 DMRMDPTSGMPVSAW-LAQADLDDITW-VIREFGEDKHARRIAKAIVEYRENELNEPLTR 182
           DMRMDP +    SAW L   +  ++   +I  +GE+  A RIA+AIV+ R       +  
Sbjct: 136 DMRMDPDAHE--SAWRLVNRERHEVLRDIIARYGEEPMAGRIARAIVDARNTG---SIDT 190

Query: 183 TSQLAKLISDAAPKSFKE--KKHPATRAFQAFRIYINSELEEIDTALRGASDILAPQGRL 240
           T QLA ++  A P  ++   + HPATR FQA R+ +N EL E++  L      LAP GRL
Sbjct: 191 TLQLAAIVERAYPAKWRATARNHPATRTFQALRMAVNDELGELERFLDAILARLAPGGRL 250

Query: 241 SVISFHSLEDRMVKRFMRKESQGPQVPHGIPLT----QDQIRALGSAKMKTVGKALKPSD 296
            VISFHSLEDR+VK  MR  ++G + P  +P        ++R L         + +  +D
Sbjct: 251 VVISFHSLEDRIVKHRMRHWAEGCRCPRHVPRCVCGHSPEVRIL-------TKRPVTATD 303

Query: 297 QEVELNPRSRSSVLRVAEKL 316
            E+  NPR+ S+ LR AEK+
Sbjct: 304 GELARNPRASSAKLRAAEKV 323