Pairwise Alignments

Query, 580 a.a., penicillin-binding protein 3 from Vibrio cholerae E7946 ATCC 55056

Subject, 631 a.a., cell elongation-specific peptidoglycan D,D-transpeptidase / peptidoglycan glycosyltransferase from Pseudomonas syringae pv. syringae B728a

 Score =  155 bits (393), Expect = 4e-42
 Identities = 164/612 (26%), Positives = 275/612 (44%), Gaps = 101/612 (16%)

Query: 26  IRWRFYLLLFFVLTAFCALVARVAYIQIIEPDNLIKEGDLRSIRAKTLQSARGIISDRNG 85
           +R R       V+   C L+AR+ Y+Q+I+ +      +   +  + +  +RG+I DRNG
Sbjct: 17  VRGRVVFGAVAVVLLVCVLIARLYYLQVIQYEYHSTLSENNRVHVQPIPPSRGLIYDRNG 76

Query: 86  EALAVSVPVEAVWADPVAIYKEGGLVEKDRWYALADVLGLDRQEMMKKIEDNR---SRRF 142
             +A + P     +  +++ +E        W ++ D +     E+++   D+R    +R 
Sbjct: 77  VVVADNRP-----SFSLSMTRE----RAGEWSSVLDTI----VEILQLTPDDRIIFEKRM 123

Query: 143 IYLQRQVSPAMAKY-----------IRELKLAGIGLKEESRRYYPAGEVSAHLVG----- 186
              +R   P    +           + + +L G+ +  +  R+YP G   AH VG     
Sbjct: 124 KQGRRPFEPVPILFELSEEQIALIAVNQFRLPGVEVVAQLVRHYPQGPHFAHSVGYMGRI 183

Query: 187 ------------VTGIDGHGLEGVERSFDSTLTGESGKSVTRKDKFGRVVENIALEEREE 234
                        +G    G  G+ER ++  L G+ G      +  GRV+  +   +   
Sbjct: 184 NEKELKSLDPINYSGTHHIGKTGIERFYEPELHGQVGYEEVETNARGRVLRVLKRTDPIP 243

Query: 235 GKPIQLTIDQRLQAIAFRAVKQAMADYRATSASAVMLDVKTGAVLAMVNAPSYNPNNRND 294
           GK I L++D +LQ     A + A+   R    + V LD  TG VLAMV+APS++PN    
Sbjct: 244 GKDIVLSLDIKLQ----EAAEAALGGRR---GAVVALDPATGEVLAMVSAPSFDPNLFVT 296

Query: 295 WQSFK------------MRNRVITDAFEPGSTVKPFVVLAALANG-IADKNTIIDTGDGT 341
             SFK            + NR++   + PGST+KP V +A L  G +   + + D G   
Sbjct: 297 GISFKAYAELRDSIDRPLFNRILRGLYPPGSTIKPAVAIAGLDTGAVTPGSRVFDPGYYQ 356

Query: 342 MQIGGSRVRDTSKVGK--ADLTLILKKSSNIGVAKLALEMPLEALLGMYSSVGLGEMSGL 399
           +     + R+ ++ G    DL   + +S++     LA ++ ++ L    +  G+G+   L
Sbjct: 357 LPNYDHKYRNWNRTGDGWVDLDTAIMRSNDTYFYDLAHKVGIDRLATYMNKFGIGQKVSL 416

Query: 400 DLVGETIGIFPNR------RRWSQFEIATLSFGYG---LAITPIQLAHAYATLGNHGKYQ 450
           D+  E+ G+ P+R      RR + F   TL  G G   +  TP+QLA A A + N G + 
Sbjct: 417 DMFEESPGLMPSREWKRATRRQAWFPGETLILGIGQGYMQATPLQLAQATALVANKGVWN 476

Query: 451 PIHI---IKG----DQHGETRQVV-DPKYVNQVLE-MLETVTQPGGTATRAAVPG-YRIA 500
             H+   I+G    D++     V+ DP    +V   M E +    GTA +AA+   YRIA
Sbjct: 477 RPHLARTIEGKAPVDENPMPDIVLRDPANWGRVNHGMQEVMHGARGTARKAAIGAQYRIA 536

Query: 501 AKSGTSRKAIAGGYSDEY-----------FAYTAGVAPVSDPRISLVVMVNEPQGDSYYG 549
            KSGT+ + +A    ++Y            A   G AP  +P+I + VMV    G+S  G
Sbjct: 537 GKSGTA-QVVAIKQGEKYDRTKVQERHRDHALFVGFAPADNPKIVVAVMVE--NGES--G 591

Query: 550 GAVAGPVFSEIM 561
             VA PV  +++
Sbjct: 592 SGVAAPVVRQVL 603