Pairwise Alignments

Query, 580 a.a., penicillin-binding protein 3 from Vibrio cholerae E7946 ATCC 55056

Subject, 629 a.a., peptidoglycan glycosyltransferase / cell elongation-specific peptidoglycan D,D-transpeptidase from Pseudomonas syringae pv. syringae B728a

 Score =  160 bits (406), Expect = 1e-43
 Identities = 170/602 (28%), Positives = 262/602 (43%), Gaps = 107/602 (17%)

Query: 38  LTAFCALVARVAYIQIIEPDNLIKEGDLRSIRAKTLQSARGIISDRNGEALAVSVPVEAV 97
           L A C LVAR+ ++Q+ E D      +   +    +   RG+I DRNGE LA + P    
Sbjct: 30  LLAAC-LVARMYFLQVTEFDYHSTISENNRVHVLPIPPERGLIFDRNGEVLADNRP---- 84

Query: 98  WADPVAIYKEGGLVEKDRWYALADVLGLDRQEMMKKIEDNRSRRFIY------LQRQVSP 151
            +  + + +E        W+ + D       E+M  +E     R ++      ++    P
Sbjct: 85  -SFNLTLTRE----RAGDWHKVID-------ELMTLLELPDEDRILFDKELKQVRHPFEP 132

Query: 152 AMAKY-----------IRELKLAGIGLKEESRRYYPAGEVSAHLVGVTG---------ID 191
           A   Y           + +  L G+ +  +  R+YP G   AH +G  G         +D
Sbjct: 133 ATLLYELTEEQIAILAVNQYLLPGVDVAAQFVRHYPLGAHFAHSIGYVGRINEKEAAHLD 192

Query: 192 GH-------GLEGVERSFDSTLTGESGKSVTRKDKFGRVVENIALEEREEGKPIQLTIDQ 244
                    G  GVER ++S L G  G      +  GRV+  +   +   GK I LT+D 
Sbjct: 193 NEYRGTQSIGKTGVERFYESELHGHVGYEEVETNAQGRVLRVLKHTDPVPGKNITLTLDA 252

Query: 245 RLQAIAFRAVKQAMADYRATSASAVMLDVKTGAVLAMVNAPSYNPNNRNDWQSFK----- 299
            LQA    A + A+ D R    S V LD +TG VLAMV+ PS++PN      SFK     
Sbjct: 253 HLQA----AAENALGDRR---GSVVALDPETGDVLAMVSKPSFDPNLFVTGISFKQYAAL 305

Query: 300 -------MRNRVITDAFEPGSTVKPFVVLAALANGIADKNT-IIDTGDGTMQIGGSRVRD 351
                  + NRV+   + PGSTVKP V +A L +G+   +T + D G   +     + R+
Sbjct: 306 RDSIDRPLFNRVLRGLYAPGSTVKPEVAIAGLDSGVVTASTKVFDPGYFQLPDFDHKYRN 365

Query: 352 TSKVGK--ADLTLILKKSSNIGVAKLALEMPLEALLGMYSSVGLGEMSGLDLVGETIGIF 409
            +  G    D+   + +S++     +A ++ ++ L    +  G+G+   LD+  E+ G+ 
Sbjct: 366 WNHSGDGWVDMDTAIMRSNDTYFYTVAHKLGIDRLHDYMTMFGIGQKVSLDMFEESAGLM 425

Query: 410 PN--------RRRWSQFEIATLSFGYG-LAITPIQLAHAYATLGNHGKYQPIHIIKG--- 457
           P+        R+ W   E   L  G G + +TP+QLA A + + + G +   H+      
Sbjct: 426 PSREWKRATRRQAWFPGETVILGIGQGYMQVTPLQLAQATSLIASKGVWHRPHLAMEVGD 485

Query: 458 ----DQHGETRQVV-DPKYVNQVLEMLETVTQPGGTATRAAVPG--YRIAAKSGTSRKAI 510
               D+H     V+ DP   NQV   ++ V        R A  G  YRIA KSGT+ + +
Sbjct: 486 TAPVDEHPMPNIVLHDPNEWNQVNTGMQMVMHDPRGIARDAAKGAQYRIAGKSGTA-QVV 544

Query: 511 AGGYSDEY-----------FAYTAGVAPVSDPRISLVVMVNEPQGDSYYGGAVAGPVFSE 559
           A    + Y            A   G AP   P+I  VV V    G++  GG VAGPV  E
Sbjct: 545 AIKQGERYNRLKTLERNRDNALFVGFAPADHPKI--VVSVTIENGEA--GGRVAGPVVRE 600

Query: 560 IM 561
           I+
Sbjct: 601 IL 602