Pairwise Alignments

Query, 580 a.a., penicillin-binding protein 3 from Vibrio cholerae E7946 ATCC 55056

Subject, 578 a.a., peptidoglycan glycosyltransferase (RefSeq) from Shewanella amazonensis SB2B

 Score =  604 bits (1558), Expect = e-177
 Identities = 304/570 (53%), Positives = 407/570 (71%), Gaps = 5/570 (0%)

Query: 10  SRVSPRVTTAEPAPIFIRWRFYLLLFFVLTAFCALVARVAYIQIIEPDNLIKEGDLRSIR 69
           S+ + R   A+P P    WR Y+++ FV   F +LV R AYIQ+IEPD L +E D+R++R
Sbjct: 2   SKQAKRNQKAQPIP----WRLYVVVGFVCLLFTSLVGRAAYIQLIEPDKLRRESDMRTLR 57

Query: 70  AKTLQSARGIISDRNGEALAVSVPVEAVWADPVAIYKEGGLVEKDRWYALADVLGLDRQE 129
             +    RG+I+DRNGE LAVSVPV+AV+ADP  ++ + G  +  RW ALADVL      
Sbjct: 58  TSSSDVQRGLITDRNGEMLAVSVPVQAVYADPKEVHDKNGFADMRRWQALADVLHEKPDA 117

Query: 130 MMKKIEDNRSRRFIYLQRQVSPAMAKYIRELKLAGIGLKEESRRYYPAGEVSAHLVGVTG 189
           ++ +++DN S+RF YL+RQ++PA+A+YIR+LKL G+ LK ESRRYYPAGE++A L+GVT 
Sbjct: 118 LISRVQDNPSKRFTYLKRQITPAVAEYIRQLKLPGVYLKPESRRYYPAGEITAQLIGVTN 177

Query: 190 IDGHGLEGVERSFDSTLTGESGKSVTRKDKFGRVVENIAL-EEREEGKPIQLTIDQRLQA 248
           ID  G+EG+E ++++ LTG   K   RK + G VVE + + +E E    + L+IDQR+Q 
Sbjct: 178 IDDVGIEGIESTYNNWLTGTPAKQKVRKSRDGHVVERLDIVQEGESPNDLVLSIDQRIQQ 237

Query: 249 IAFRAVKQAMADYRATSASAVMLDVKTGAVLAMVNAPSYNPNNRNDWQSFKMRNRVITDA 308
           +A+R +K+A   ++ATS S V++DV TG VLAM N PSYNPN+R+DWQSFKMRNR +TD 
Sbjct: 238 LAYRELKRATEMHQATSGSVVVIDVLTGEVLAMANTPSYNPNSRDDWQSFKMRNRAVTDT 297

Query: 309 FEPGSTVKPFVVLAALANGIADKNTIIDTGDGTMQIGGSRVRDTSKVGKADLTLILKKSS 368
           FEPGSTVKPFVV AAL +G    + II T  G M++GG +VRD++  G   LT IL KSS
Sbjct: 298 FEPGSTVKPFVVAAALESGTVKASDIIPTSPGWMRLGGRQVRDSNNYGDMSLTKILVKSS 357

Query: 369 NIGVAKLALEMPLEALLGMYSSVGLGEMSGLDLVGETIGIFPNRRRWSQFEIATLSFGYG 428
           N+GVAKL+L MP+E LLG Y S+GLG  SG+ L GE+ G+   + RWS FE ATL+FGYG
Sbjct: 358 NMGVAKLSLGMPVEQLLGTYYSIGLGNYSGIGLPGESAGLIQEKHRWSDFERATLAFGYG 417

Query: 429 LAITPIQLAHAYATLGNHGKYQPIHIIKGDQHGETRQVVDPKYVNQVLEMLETVTQPGGT 488
           L  T +QLA  YATLGN G   P  I+K  Q  E +QV+ P+  N V+ ML  VT+ GGT
Sbjct: 418 LTTTTLQLARMYATLGNGGVLYPASILKLKQKPEGQQVLSPQVANNVMNMLVGVTEQGGT 477

Query: 489 ATRAAVPGYRIAAKSGTSRKAIAGGYSDEYFAYTAGVAPVSDPRISLVVMVNEPQGDSYY 548
           A +A + GY +A K+GTSRKA+AGGY D+Y A  AGVAPV++PR+++ V++NEP+GD YY
Sbjct: 478 ARKAHIDGYPVAGKTGTSRKAVAGGYGDDYLATFAGVAPVNNPRLAIAVVINEPKGDRYY 537

Query: 549 GGAVAGPVFSEIMKGALQILNIAPDENRFQ 578
           GG V+ PVFS++M GALQ+LN+ P   R Q
Sbjct: 538 GGDVSAPVFSKVMAGALQMLNVEPISTREQ 567