Pairwise Alignments

Query, 580 a.a., penicillin-binding protein 3 from Vibrio cholerae E7946 ATCC 55056

Subject, 599 a.a., Peptidoglycan glycosyltransferase (NCBI) from Rhodospirillum rubrum S1H

 Score =  176 bits (445), Expect = 3e-48
 Identities = 138/509 (27%), Positives = 240/509 (47%), Gaps = 48/509 (9%)

Query: 76  ARGIISDRNGEALAVSVPVEAVWADPVAIYKEGGLVEKDRWYALADVLGLDRQEMMKKIE 135
           AR  I DRNG  LA ++P   ++AD  AI       E+DR  A+A +  L  +  +  + 
Sbjct: 95  ARADIVDRNGLVLATNLPTVNLYADTRAI------PERDRLRAIAVLPTLFPELTVADLT 148

Query: 136 DNR--SRRFIYLQRQVSPAMAKYIRELKLAGIGLKEESRRYYPAGEVSAHLVGVTGIDGH 193
           +     R FIYL+R ++P+  + + +L + G+  +   RR YPAG + AH+VG T +D +
Sbjct: 149 NKMVPGRAFIYLRRNLTPSEQQSVNDLGIPGLHFERSERRVYPAGRLVAHVVGATDVDNN 208

Query: 194 GLEGVERSFDSTLTGESGKSVTRKDKFGRVVENIALEEREEGKPIQLTIDQRLQAIAFRA 253
           G+ G+E++F+S LT                             P++L++D R+Q    RA
Sbjct: 209 GIAGLEKAFESKLTSSD-------------------------LPLRLSLDIRVQHAIHRA 243

Query: 254 VKQAMADYRATSASAVMLDVKTGAVLAMVNAPSYNPNNRNDWQSFKMRNRVITDAFEPGS 313
           ++ ++  ++A   +A+++DV+T  V+AMV+ P Y P            NR     FE GS
Sbjct: 244 LQDSIDHFQAIGGAALVMDVETAEVVAMVSLPDYEPEKIGAASEDARFNRATLGVFEMGS 303

Query: 314 TVKPFVVLAALANGIADKNTIIDTGDGTMQIGGSRVRDTSKVGK-ADLTLILKKSSNIGV 372
           T K F    AL  G+    +        ++I    + D    G+   +  IL  SSN+G 
Sbjct: 304 TFKLFNTALALDAGLKLSESF--DARNPIRISRFTITDFHPEGRWLSIPEILMYSSNLGS 361

Query: 373 AKLALEMPLEALLGMYSSVGLGEMSGLDLVGETIGIFPNRRRWSQFEIATLSFGYGLAIT 432
           A++A+ +  +        +GL +    ++      + PN   W +    T+SFG+GL++T
Sbjct: 362 ARMAVAVGTDRQREFLGRMGLLDAIPFEIPEVGRPLVPN--PWREVSTMTISFGHGLSVT 419

Query: 433 PIQLAHAYATLGNHGKYQPIHII--KGDQHGETRQVVDPKYVNQVLEMLETVTQPGGTAT 490
           P+ L    + L N G  +P  ++    +     +QV+  +    +  ++  V +  G+  
Sbjct: 420 PLHLVTGVSALVNGGLLRPPTLLLRSPETTPAGKQVLTTQNSTAMRALMRLVVE-AGSGK 478

Query: 491 RAAVPGYRIAAKSGTSRK-AIAGGYSDEYFAYT-AGVAPVSDPRISLVVMVNEPQG-DSY 547
            A V GY I  K+G++ K   +GGYS      +  GV P++ PR  ++ M+++P+     
Sbjct: 479 NADVKGYYIGGKTGSAEKEGASGGYSKSAVRTSFVGVFPMTKPRYVVMAMLDDPKAVKGT 538

Query: 548 YGGAVAG----PVFSEIMKGALQILNIAP 572
           YG   AG    P    ++     +L + P
Sbjct: 539 YGYRTAGWNATPTVGRMIAEIAPLLGVQP 567