Pairwise Alignments

Query, 580 a.a., penicillin-binding protein 3 from Vibrio cholerae E7946 ATCC 55056

Subject, 681 a.a., Peptidoglycan glycosyltransferase (NCBI) from Rhodospirillum rubrum S1H

 Score =  170 bits (431), Expect = 2e-46
 Identities = 179/619 (28%), Positives = 271/619 (43%), Gaps = 102/619 (16%)

Query: 43  ALVARVAYIQIIEPDNLIKEGDLRSIRAKTLQSARGIISDRNGEALAVSVPVEAVWADPV 102
           AL AR+ Y+Q+IE D  +   +      + L   RG I DR G+ LAV+     V     
Sbjct: 28  ALAARMYYLQVIESDRYLTLAEENRFNLRLLPPPRGHIVDRFGDQLAVNRQNYRVSIIAE 87

Query: 103 AIYKEGGLVEKDRWY--ALADVLG-------LDRQEMMKKIEDNRSRRFIYLQRQVS--P 151
            I ++    E+ +    A  D LG        DR  +++ ++  RS   + ++  ++   
Sbjct: 88  DILRQVRTAEERQLAIDATLDALGKIVPLSDYDRTRVLRDMKRRRSFVPVTIRENLTWEE 147

Query: 152 AMAKYIRELKLAGIGLKEESRRYYPAGEVSAHLVG---------VTG-----IDGH--GL 195
             A  + +L L GI + E   R+YP G+++AHL+G         VTG     + G   G 
Sbjct: 148 MAAIEVHKLDLPGITIDEGLSRHYPYGDLAAHLLGYVSSVSEEEVTGDPLLELPGFRIGK 207

Query: 196 EGVERSFDSTLTGESGKSVTRKDKFGRVVENIALEEREEGKPIQLTIDQRLQAIAFRAVK 255
           +GVE+ +D  L G  G S    +  GRV++    E+   G  + LTID RLQ+ A R + 
Sbjct: 208 QGVEKVYDLALRGHGGTSRVEVNALGRVMDEQTTEDASAGAELPLTIDMRLQSFASRRL- 266

Query: 256 QAMADYRATSASAVMLDVKTGAVLAMVNAPSYNPN------NRNDWQSF------KMRNR 303
                  + SASAV++D+ TG +L+MV+ P+Y+PN      +  +WQ         + N+
Sbjct: 267 ------ASESASAVIIDIHTGDILSMVSMPAYDPNAFTRGLSSAEWQDLVRNPRSPLTNK 320

Query: 304 VITDAFEPGSTVKPFVVLAALANGI--ADKNTIIDTGDGTMQIGGSRVRDTSKVGKADLT 361
            I   + PGST K  V LAAL  G+  AD+        G M++GG R     K G   L 
Sbjct: 321 AIAGQYSPGSTFKMVVALAALEGGVIKADQTVFC---PGHMELGGHRFHCWKKGGHGSLN 377

Query: 362 LI--LKKSSNIGVAKLALEMPLEALLGMYSSVGLGEMSGLDLVGETIGIFPNR------- 412
           L+  L +S ++   +LA    ++ +  M    G+GE+  + L GE  G+ P R       
Sbjct: 378 LVGALAESCDVYFYELARRCGIDRIAEMARRFGIGEILDVGLPGERSGLMPTRAWKAATL 437

Query: 413 -RRWSQFEIATLSFGYGLAI-TPIQLAHAYATLGNHG-KYQP---IHIIKGDQHG----- 461
              W Q E      G G  + TP+QLA   A + N G K  P       K D  G     
Sbjct: 438 GEGWHQGETLLAGIGQGYVLTTPLQLAVMTARIANGGLKIMPRLSRFAAKPDSPGFLAAS 497

Query: 462 -ETRQVVDPKYVNQV------LEMLETVTQPGGTATRAA---VPGYRIAAKSGTS----- 506
            +    V P  V +         M   V    GTA RAA   V G+ ++ K+GT+     
Sbjct: 498 AQEVPAVPPLGVAKAHLDAVRRGMWAVVNGDRGTARRAAGIPVAGWEMSGKTGTTQVRRI 557

Query: 507 --RKAIAGGYSDEYF-------AYTAGVAPVSDPRISLVVMVNEPQGDSYYGGAVAGPVF 557
             R+   G   ++         A     AP   PR ++ + V    G    G + AGP+ 
Sbjct: 558 SMRERETGIRREDQLPWELRNHALFVCYAPEDAPRYAVALCVEHGGG----GSSAAGPIA 613

Query: 558 SEIMKGALQILNIAPDENR 576
            +IM   L+ L + P   R
Sbjct: 614 RDIM---LETLRLDPARKR 629