Pairwise Alignments

Query, 580 a.a., penicillin-binding protein 3 from Vibrio cholerae E7946 ATCC 55056

Subject, 584 a.a., penicillin-binding protein 2 from Rhodopseudomonas palustris CGA009

 Score =  195 bits (496), Expect = 4e-54
 Identities = 141/518 (27%), Positives = 254/518 (49%), Gaps = 34/518 (6%)

Query: 63  GDLRSIRAKTLQSARGIISDRNGEALAVSVPVEAVWADPVAIYKEGGLVEKDRWYALADV 122
           G  R+     + +AR  I DRNG+ LA  V   +++ +P  +  +   VE       A +
Sbjct: 68  GARRTGSQDAVATARPDIVDRNGQVLATDVKTPSLFGEPRRLIDQDEAVE----LLTATL 123

Query: 123 LGLDRQEMMKKIEDNRSRRFIYLQRQVSPAMAKYIRELKLAGIGLKEESRRYYPAGEVSA 182
             L+ QE+ +++   +   F++L+R+++P     I++L + GIG   E++R YP     +
Sbjct: 124 PDLETQEVRERLASKKG--FVWLKREITPRQQAEIKKLGIPGIGFLRENKRVYPNAAEVS 181

Query: 183 HLVGVTGIDGHGLEGVERSFDSTLTGESGKSVTRKDKFGRVVENIALEEREEGKPIQLTI 242
           HL+G+  ID  G+ G+E+  D+    +  ++    D+  R              PI+L +
Sbjct: 182 HLIGLVNIDNQGIAGIEKWLDNNGLADLHRAGFASDRMQR--------------PIELAL 227

Query: 243 DQRLQAIAFRAVKQAMADYRATSASAVMLDVKTGAVLAMVNAPSYNPNNRNDWQSFKMRN 302
           D R+       + +A   Y A +AS ++ +VKTG ++AMV+ P ++PNN  +       N
Sbjct: 228 DVRVTHALRDELIKAKEKYSAKAASGLVSNVKTGEIVAMVSLPDFDPNNPREANDPDRIN 287

Query: 303 RVITDAFEPGSTVKPFVVLAALANGIADKNTIIDTGDGTMQIGGSRVRDTSKVGKA-DLT 361
           R+ T  +E GST K   +  AL  G A  +++ D   G +  G  ++ D+  +G+A  L 
Sbjct: 288 RLTTGVYEMGSTFKTLTLAMALDAGKATLHSMYD-ARGPLHYGKFKIHDSHNMGRAISLA 346

Query: 362 LILKKSSNIGVAKLALEMPLEALLGMYSSVGLGEMSGLDLVGETIGIFPNRRRWSQFEIA 421
            +   SSN+G A++AL M +EA       VG  +    +L      I P  +RWS+    
Sbjct: 347 EVFTYSSNVGAARVALSMGVEAHKAFLKKVGQLDRLRTELPESASPIVP--KRWSELNTI 404

Query: 422 TLSFGYGLAITPIQLAHAYATLGNHGKYQPIHIIKGDQHGET---RQVVDPKYVNQVLEM 478
           T+SFG+G+A+ P+Q       + N G   P   +K  +       ++V+  +  +++  +
Sbjct: 405 TISFGHGVAVAPLQAVMGINAMVNGGYLIPPTFLKRTEEDAKKLGKRVIKTETSDKIRYL 464

Query: 479 LETVTQPGGTATRAAV-PGYRIAAKSGTSRKAIAGGYSDEYF--AYTAGVAPVSDPRISL 535
           +    + G   T   +  GY I  K+GTS K + G Y+ +    ++TA + P  +P+  +
Sbjct: 465 MRLNAEVGTAKTADQIAKGYYIGGKTGTSEKVVNGRYAKKQVLNSFTA-ILPADNPQYQV 523

Query: 536 VVMVNEPQG-DSYYGGAVAGPVFSEIMKGALQILNIAP 572
           +VM++EP+     +G   +G  ++ +  G   I  IAP
Sbjct: 524 LVMLDEPKALPETHGFITSG--WNAVPTGGKVIERIAP 559